Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5836 |
Symbol | |
ID | 4096830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 389610 |
End bp | 390491 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638019108 |
Product | LysR family transcriptional regulator |
Protein accession | YP_625674 |
Protein GI | 107028579 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.468249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCAAC TTCAATCGAT TCGGGCATTC GTGACGGTGG CAAGGGAAGG CGGGTTTCGC CGGGCGGCGA CGCGGTTGCG CGTGTCGACC GCGATGGCGA GCCGGCTGGT CGACGCGCTC GAGACGCGCC TCGGCGCGCG CCTGCTTCAA CGCAGTACGA GCCATCAGTC GCTGACGGAA ATCGGCGAGC TGTATCTCGC GCGCGTCGAG CGGATTCTCG GTGCGATCGA CGAGATCGAC GGTCGTTTCG TCGCGATGGG CAGCAAGCCG GAAGGCGTGC TGCGCGTGGC CGCGCCGGTT GCGTTCGGGC TCAGCCAGTT GAGCGCGCTG CTCGATCGTT TCGTGCACCG GTTTCCGGAC GTGCGGCCGA CCGTGACGCT GACCGATGCC CACGTCGACC TGACTGCCGA GGACATCGAC GTCGCGTTCC TGACGGACGG CATGCCGGTG TCCGGCGCAC ACGCGTTGCA TACGCTGGCC GCGTACGAAT CCGTGCGGGT CGCGGCGCCC GATTATGTCG CCGCGCACGG CGGCGCTGCG GCATCGGGCG ACTGGCCGGA CATCGCGGCC GTGCGGCTGG AGCTGCCGGC GGCCGATGAC GACCCCATGG CCGGGGTGCG ATCCGGTGCG GCAACGAGCA ATGCAGGCGT CGGCCATCTC GAGATGGCGC GGCGGCTGGC CGTGGCCGGC ATGGGTGCCG CGGTGTTGCC CGCATATCTC GTCGAGGCCG ATCTGGCAGC CGGCACGCTG GTGCGCGTGG CCCCACTGCA CCCGCTCGCG CCCGTCACGT TGAAGCTCGC GCATGCGCGT GCCGCGCGTT TGCCGGCCGC CGCGCGCGCG TTCATCGAAT TCGCCGGCGC CGCATTCCGG CCCGCGCGCT AG
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Protein sequence | MDQLQSIRAF VTVAREGGFR RAATRLRVST AMASRLVDAL ETRLGARLLQ RSTSHQSLTE IGELYLARVE RILGAIDEID GRFVAMGSKP EGVLRVAAPV AFGLSQLSAL LDRFVHRFPD VRPTVTLTDA HVDLTAEDID VAFLTDGMPV SGAHALHTLA AYESVRVAAP DYVAAHGGAA ASGDWPDIAA VRLELPAADD DPMAGVRSGA ATSNAGVGHL EMARRLAVAG MGAAVLPAYL VEADLAAGTL VRVAPLHPLA PVTLKLAHAR AARLPAAARA FIEFAGAAFR PAR
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