Gene Bcen_5819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5819 
Symbol 
ID4096813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp368028 
End bp369089 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content68% 
IMG OID638019091 
Producthypothetical protein 
Protein accessionYP_625657 
Protein GI107028562 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0211958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCCGA GACATTCCGC GATTTTCGTC GCGCTCGCCG CCGCCGCCCT GTTCGGCGCC 
GCGACACCGC TCGCCAAGGC GCTGATCGGT GCAATGTCGC CGTTCATGGT TGCCGGCCTC
TTCTATTTCG GCAGCGGCGT CGGGCTCGGC ATCGGGATTC TGCTGCGCGG TTGGCACAGC
CGTCGCGCAT CGGCCGCGGA CGCCGCGCCG TTGCATCGTG CCGGTCTGCC GTGGCTGGCC
GGTGCGATCG CGGCGGGCGG CGTGGCCGGC CCCGCTTTGC TGATGCTCGG GCTGTCGAGT
ACGCCGGCGG CGACGAGCGC GTTGCTGCTC AATCTCGAAG GCGTGTTGAC GGCGGTGATC
GCGTGGGTCG TGTTTCGCGA GAACGTGGAT ACGCAGGTGT TCCTCGGCAT GGTGGCGATC
GTCGCTGGCG GCACGCTGTT GTCGTGGACG CCAGGCCGGG CCGGCGTGCC GGTCGGCGCG
CTGCTGATCG TCGGTGCGTG CCTGTGCTGG GCGGTCGACA ACAACCTGAC CCGCAAGGTG
GCCGCGAACG ACGCGATGGT GATCGCATGC ATGAAAGGGC TGATCGCGGG GCCGGTGAAC
ATCGGCATCG CGCTGGCGGC CGGCGCGACG CTACCTGCGC TACCGGTCGC GGCCGCGGCG
ATGCTGACGG GGCTCGGCGG CTACGGGATC AGCCTCGTGT TGTTCGTGGT CGCGCTGCGT
CATCTCGGCA GCGCGCGCAC TGGCGCATAT TTTTCGGTCG CCCCGCTATT CGGAGTCGCA
CTGTCGCTGC TGATCTGGCC CGCGCTGCCG CCCGCGACGT TCTGGATCGC GGCCGCGCTG
ATGGCGCTCG GCCTCTGGCT GCACGTGCGC GAACGGCACG AACACACGCA CGTGCACGAG
CGGCTCGAGC ATACGCATCG GCATCGGCAC GACGACCATC ACCAGCACGC GCACGACTTT
CCGTATGACG GCAACGAACC GCACACGCAT CCGCACGTGC ATCTGCCGAT CACGCACAGC
CACGCGCATT TTCCGGACAT TCATCACCGG CATCGGCATT GA
 
Protein sequence
MNPRHSAIFV ALAAAALFGA ATPLAKALIG AMSPFMVAGL FYFGSGVGLG IGILLRGWHS 
RRASAADAAP LHRAGLPWLA GAIAAGGVAG PALLMLGLSS TPAATSALLL NLEGVLTAVI
AWVVFRENVD TQVFLGMVAI VAGGTLLSWT PGRAGVPVGA LLIVGACLCW AVDNNLTRKV
AANDAMVIAC MKGLIAGPVN IGIALAAGAT LPALPVAAAA MLTGLGGYGI SLVLFVVALR
HLGSARTGAY FSVAPLFGVA LSLLIWPALP PATFWIAAAL MALGLWLHVR ERHEHTHVHE
RLEHTHRHRH DDHHQHAHDF PYDGNEPHTH PHVHLPITHS HAHFPDIHHR HRH