Gene Bcen_5809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5809 
Symbol 
ID4096668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp357528 
End bp358706 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content69% 
IMG OID638019082 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_625648 
Protein GI107028553 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.274914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACCCC TCGACGGCAT CAAGGTGATC ACCCTCGAAC ATGCGATCGC GGCGCCGTTC 
TGCACGCGCC AGCTCGCCGA TCTCGGCGCG CGCGTGATCA AGATCGAACG GCCCGGCAGC
GGCGATTTCG CGCGCGGCTA CGACGAACGC GTGCACGGGC TGTCGTCGCA CTTCGTGTGG
GTGAACCGCT CGAAGGAGAG CCTGACGCTC GACGTCAAGC AACCCGATGC GGCCGCCGTG
CTCGACGCGC TGCTCGCGGA TGCCGACGTG CTCGTGCAGA ATCTCGCGCC CGGCGCGGCC
GAGCGGCTCG GCCTCGGCTA CGACGCATTG AAGCACACGC ATCCGCGCCT GATCGTCTGC
GACATCTCGG GTTACGGCGG CGACGGCCCG TATCGCGACC GCAAGGCCTA CGACCTGCTG
ATCCAGAGCG AAGCCGGGTT CCTGTCGATC ACGGGCTCGG CCGGGCAACC GGCGAAGGCC
GGCTGCTCGA TCGCGGACAT CGCGGCCGGC ATGTACGCGT ACACCAGCAT CCTGAGCGCG
CTGCTGATGC GCGGCCGCAC CGGTGAAGGT TGCCGGATCG ACGTGTCGAT GCTGGAGAGC
ATGGTCGAGT GGATGGGCTA CCCGCTCTAC TACGCGATCG ACGGCCAAAG CCCGCCCTCG
CCATCGGGCG CGTCGCACGC GACGATCTGC CCGTACGGGC CGTTCCCGGC CGGCGACGGC
AAGACCGTGA TGCTCGGGCT GCAGAACGAG CGCGAATGGA AGCTGTTCTG CGAGCAGGTG
CTGCGGCAGC CGGCGCTGGC CGACGATCCG CGTTTCAATG CGAATTCGAA ACGGCATGCG
GCGCGCGACG TGGTGGATGC GCTGATCGTC GATGCATTTG CGACGCTGAC GGCCGCCGAC
GTGATGCAGC GGCTCGACGC GGCCGGTATC GCGAACGCAC GGATGAACAC GCTCGACGAC
GTATGGCTTC ACCCGCAATT GCAGGCGCGG GAGCGCTGGC GCAGCGTCGA CACGGCCGCG
GGCCCGGTGC CAGCGCTATT GCCGCCCGGC CTGCCGGCCG GCGTCGAGCC GCGCATGGAT
GCGGTGCCGG CGCTCGGCCA GCATACCGAC GCGATCCTCT CGGAACTCGG CTACGACCGC
GCGCGGATCG ATGCGCTGCG CGCGAACGGC ACGATCTGA
 
Protein sequence
MRPLDGIKVI TLEHAIAAPF CTRQLADLGA RVIKIERPGS GDFARGYDER VHGLSSHFVW 
VNRSKESLTL DVKQPDAAAV LDALLADADV LVQNLAPGAA ERLGLGYDAL KHTHPRLIVC
DISGYGGDGP YRDRKAYDLL IQSEAGFLSI TGSAGQPAKA GCSIADIAAG MYAYTSILSA
LLMRGRTGEG CRIDVSMLES MVEWMGYPLY YAIDGQSPPS PSGASHATIC PYGPFPAGDG
KTVMLGLQNE REWKLFCEQV LRQPALADDP RFNANSKRHA ARDVVDALIV DAFATLTAAD
VMQRLDAAGI ANARMNTLDD VWLHPQLQAR ERWRSVDTAA GPVPALLPPG LPAGVEPRMD
AVPALGQHTD AILSELGYDR ARIDALRANG TI