| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5794 |
|---|
| Symbol | |
|---|
| ID | 4096462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | + |
|---|
| Start bp | 340178 |
|---|
| End bp | 341563 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638019068 |
|---|
| Product | general substrate transporter |
|---|
| Protein accession | YP_625634 |
|---|
| Protein GI | 107028539 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.390402 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGATACG TGCCATCGTG GACTTCCGTT TCCGCCGCGT CGTCGATTCC CGACGACGCG
ACCACCCAGC GCGGCGACGA GCCGCACAGC CTGCCGCGGG TCGCGATCGC GGCCGCCGCC
CTCGGCAATG CAACCGAATG GTTCGATTAC GGTATTTACG CGTACGGTCT CGCGTACATT
TCCGCCGCGC TGTTTCCCGG CAACACCGCC AGCGCGACGC TGTTCGCCCT CGGCACGTTC
GCGATCTCGT TCCTGATCCG CCCGCTCGGC GGCCTGTTCT GGGGGCCGCT CGGCGACCGG
CTCGGCCGCA AGCGCGTGCT CGGGCTGACG GTCCTGACGA TGTCGGGCGC CACGTTGCTC
GTCGGCGTGC TGCCGAGCTA TGCGACGGCC GGCTGGCTCG CGCCGGCCGC GCTGATCGTG
CTGCGCATGG TGCAAGGTTT CTCGACCGGC GGCGAATACG GCGGTGCGGC GACCTTCATC
GCCGAATACG CACCCGATTC GCGGCGCGGC CTGTGCGGCA GCTTCCTCGA ATTCGCGACG
CTCGCCGGCT TCTCGCTCGG CGCGTTCCTG ATGCTCGGCT TCGCGCTGCT GCTCGGCGAT
TCGGCGATGC ATGCGTGGGG CTGGCGCCTG CCGTTCCTCG TCGCGGCGCC GCTCGGCCTG
ATCGGCTTCT ACCTGCGCTC GCGCCTCGAG GAAACGCCGG TGTTCCGCGA GCTGGAGGAA
CAGGCACACC GCCGCGAGAA AAGTGCCACC GCCGCGCTGC CGATCCGGCT GCTGCTGGTG
CGCTATGCGA AGCCGCTGCT GCTGCTCGGC GGGCTGGTCG TCGCGCTGAA CGTCGTCAAC
TACGTGCTGC TCGCGTACAT GCCGACCTAC ATGCACAAGG AACTCGGCGT GAGCGAGAAC
ATGTCGCTGC TGATTCCGCT GATCGGCATG CTCGCGATGA TGGTGCTGCT GCCGTTCGCC
GGCTGGCTGT CGGACCGCGT CGGCCGCAAG ACGATGTGGT GGTTCTCGCT CGTCGGGCTG
TTCGTCGCGG CCGTGCCGAT GTTCACGCTG ATGACGCACG GTCCGCTCGG CGCCTTCATC
GGCTTCGCGG TGCTCGGCGT GCTCTACGTG CCGCAGCTCG CCACCATTTC CGCGATGTTC
CCGGCGATGT TCCCGACCCA CGTCCGCTAT GCGGGCATGG CGATCGCATA CAACGTGTCG
ACGTCGCTGT TCGGCGGCAC CGCGCCGATC GTCAACGACT GGCTGATCGG CAAGACCGGC
AACGCGCTGA TTCCCGCGTA CTACATGATG GCTGCCTGCG CGGTCGGGCT GATCGCGCTG
CTGGCGGTGA TCGAGACGCG CGGGTGTTCG CTGCGCGGGG AAGCCGTGCC GGGACAACCG
GGTTGA
|
|---|
| Protein sequence | MRYVPSWTSV SAASSIPDDA TTQRGDEPHS LPRVAIAAAA LGNATEWFDY GIYAYGLAYI
SAALFPGNTA SATLFALGTF AISFLIRPLG GLFWGPLGDR LGRKRVLGLT VLTMSGATLL
VGVLPSYATA GWLAPAALIV LRMVQGFSTG GEYGGAATFI AEYAPDSRRG LCGSFLEFAT
LAGFSLGAFL MLGFALLLGD SAMHAWGWRL PFLVAAPLGL IGFYLRSRLE ETPVFRELEE
QAHRREKSAT AALPIRLLLV RYAKPLLLLG GLVVALNVVN YVLLAYMPTY MHKELGVSEN
MSLLIPLIGM LAMMVLLPFA GWLSDRVGRK TMWWFSLVGL FVAAVPMFTL MTHGPLGAFI
GFAVLGVLYV PQLATISAMF PAMFPTHVRY AGMAIAYNVS TSLFGGTAPI VNDWLIGKTG
NALIPAYYMM AACAVGLIAL LAVIETRGCS LRGEAVPGQP G
|
|---|
| |