Gene Bcen_5788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5788 
Symbol 
ID4096456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand+ 
Start bp333658 
End bp334305 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content68% 
IMG OID638019062 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_625628 
Protein GI107028533 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.51444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACGT CCGGATCGCT CTACGGGTTT CTCGTCATCG GCGGCATGCT CGCGGTCACG 
CCGGGGCCGA ACATGGTCTA CGTGATGTCG CGCTCGATCG CGCAAGGGCG GGCGGCGGGC 
CTCGTTTCGC TCGCGGGCGT GATGCTCGGC TACCTGTTCT ACATGTTCGC CGCGGCGTTC 
GGCATCACGA CGCTGTTCAT GAGCGTGCCC TATGCGAGCA GCGTGCTGGG CGCGGTCGGG 
GCGACCTATC TGCTGTACCT CGCATGGCAG GCGGTGCGGC CCGGCGGCCG CTCGCCGTTC 
GAGGTGAAGA CGCTGCCGAA CGAGCAGCCG CTGCGGCTGC TCGCGATGGG CGCGACGACC 
AGCGTGCTGA ACCCGAAGCT CGCGATGCTG TTCGTGTCGC TGTTGCCGCA GTTCATCGAC 
TACGGGCATG GCAGCGTGTT CGGCCAGTCG CTGTTTCTGG GCTCGCTACT GATTGCCGCA 
TTCGCGTCGG CCAACGGGCT GGTGGCGATC TGCTCGGGCA GCCTGGCGAA GTTCCTGCAC 
GGCCGCCCGA CGCTGCTGCT CGCGCAGCGC TGGGCAATGG GCGCGGTGCT CGGCGGCCTC 
GGCGTGGAAA TGCTCGTCGA GGCGTCGAAG TCGGCGGGCA TCGCGTAA
 
Protein sequence
MQTSGSLYGF LVIGGMLAVT PGPNMVYVMS RSIAQGRAAG LVSLAGVMLG YLFYMFAAAF 
GITTLFMSVP YASSVLGAVG ATYLLYLAWQ AVRPGGRSPF EVKTLPNEQP LRLLAMGATT 
SVLNPKLAML FVSLLPQFID YGHGSVFGQS LFLGSLLIAA FASANGLVAI CSGSLAKFLH 
GRPTLLLAQR WAMGAVLGGL GVEMLVEASK SAGIA