| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5787 |
|---|
| Symbol | |
|---|
| ID | 4096455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | - |
|---|
| Start bp | 332698 |
|---|
| End bp | 333546 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638019061 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_625627 |
|---|
| Protein GI | 107028532 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC TCGACCTCGA TGTGCTCGCG ATGGTGGTGG CCGTCGCGGA ATCCGGATCG
TTTGCGCAGG GTGCGCAGGC CGTGCACCGG TCGCCGTCGG CGGTGAGCAT GCAGATCAGG
ACGCTGGAAG ACGCGCTCGG CAAGCCGCTG TTCATCCGCG ACACGCGCAA CGTGACGCCG
ACCGACGACG GCAGGATGCT CGCCGACTAT GGCCGCCGGA TGCTCGCGAT GCGCGACGAG
GCGTGGGCGT CGGTCGTGCG TCCGGAGATC CGCGGCCGCG TGACGATCGG CGTGCCCGAC
GATTACATCT CGTCGCTGCT GCCGCAGGTG CTCGGCAAGT TCGCCGCGAT GCATCCGCGT
GTGGAAGTGC GCGTGATCGG CCAGCCGAGC AGCGCGCTCG TGCCGATGCT GAAGGACAAC
ACGGTCGATC TCGCATGCAT GACTCGCGTC AAGGGCGTGT CCGGCGAGCT GATCCGGCTC
GAGCCGATCG TCTGGACGGG ATCGCCGAAA CGGAACGTGT GGGAAGAGCG GCCGCTGCCG
GTTGCGCTGT TCTCGCATGG CAGCACGGCG CGCGACCATG CGATCAAGGC GCTGAACCGG
CGGAAGATTC CGTTCCGGAT GTCGTACGAA AGCCCGAGTT TCCTCGGGCT GCTCAGCATG
GTCGAGGCCG GCCTCGCGAT CGCGCCGCTC GCGCGCTGCT GCGTGCCCGA TCACCTGTTG
CAGCTGTCGG AGAGCCACGG GCTGCCGTCG CTCGGCGAAC TCGACGTCGT GCTCGCGCGC
AGCGCGCAGT CCGCGCGGCC GCCGTGCGAC TACCTTGCCG AGCAGATTCT CGGCGAGTGG
CGCGCCTGA
|
|---|
| Protein sequence | MKKLDLDVLA MVVAVAESGS FAQGAQAVHR SPSAVSMQIR TLEDALGKPL FIRDTRNVTP
TDDGRMLADY GRRMLAMRDE AWASVVRPEI RGRVTIGVPD DYISSLLPQV LGKFAAMHPR
VEVRVIGQPS SALVPMLKDN TVDLACMTRV KGVSGELIRL EPIVWTGSPK RNVWEERPLP
VALFSHGSTA RDHAIKALNR RKIPFRMSYE SPSFLGLLSM VEAGLAIAPL ARCCVPDHLL
QLSESHGLPS LGELDVVLAR SAQSARPPCD YLAEQILGEW RA
|
|---|
| |