| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5762 |
|---|
| Symbol | |
|---|
| ID | 4096411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | + |
|---|
| Start bp | 306539 |
|---|
| End bp | 307636 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638019037 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_625603 |
|---|
| Protein GI | 107028508 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGG CCCCGCCCCG CGGCGGCGCA TCGCGGGCAC GCCGCGGCAG CGGCCGCTCG
GTGCTCGGCG ACGTCGCGAA ACTGGCCGGC GTGTCGACCG CGACCGTCTC GCGCGTGTAC
AACGACCCCG GCAAGGTGTC GGCCGACGTG CAGCAGCGCG TGCGCGACGC GGCGCTCGCA
CTGAACTGGA TTCCGAATGC GGCCGGCCGC GCGCTGGCGT CCACGCGTAC CCACATTACC
GGCGCGATCA TTCCGACCCT CGACGACCAG GTGTTCGCGT CGCAGGTCGC CGGCATGCAG
ACGATCATGG CCGAGCACGG CATCACGCTG TTCCTCGGCT GCTCGAACTA CGACCCCGCG
CAGGCGCTCG CGCAGGTGCG CGCGATGCTG TCGCGCGGCG TGGAAGCGGT ATCGCTGGTC
GGCGAAGCGT ACCCGCCCGA ACTGTTCGAA CTCCTTGCGA TGCATCGCGT GCCGTACGTC
GTCACGTATG CGTACCGCGA CGACAGCCCG CACTGCTGCA TCGGCTTCGA CAACCGCGCG
GCGTTCGCGC GGCTCACCAC GCACCTGCTC GACCTCGGCC ATCGCGATTT CGCGATCATC
ATGCAGCCGT CGACGGACAA CGACCGTGTC CAGGCCCGCC TGCGCGGCAT TCACGACACG
CTGGCCGCGC ACGGGCTCGC GGTGCGCCCC GTGCACCAGC ACGAAGGCGC GGCCACGATC
GCGTTCGGGC GGGCGAGCCT GCGCGCGATC GCCGGCAGCG ATGCGGTGAC ACGGCCGACC
GCCGTGATCT GCGGCAACGA CGCGCTCGCG CTCGGCGCGT TGCTCGAAGC GCAGGCGCTC
GGCATCGACG TGCCCGCGCA GTTGTCGATC ACCGGGTTCG ACGACGTCGC GCTCGCGCGC
GAGATCCAGC CGCCGCTGAC GACGATGTGG GTCGACACCG ACGCGATCGG GCGCCAGGCC
GCGCACGCGT TGCTCGACGC GCTCGAGAAC GGCGCCACGG GGCCCGGCCA TGCCGTCCAG
CCCGAGTTGC GCATACGGGA ATCCGCCGCG GCGCCGGCGA AGACGCAGAC GCAGGCGCGC
ACGGCACGCG GGAAATAG
|
|---|
| Protein sequence | MSTAPPRGGA SRARRGSGRS VLGDVAKLAG VSTATVSRVY NDPGKVSADV QQRVRDAALA
LNWIPNAAGR ALASTRTHIT GAIIPTLDDQ VFASQVAGMQ TIMAEHGITL FLGCSNYDPA
QALAQVRAML SRGVEAVSLV GEAYPPELFE LLAMHRVPYV VTYAYRDDSP HCCIGFDNRA
AFARLTTHLL DLGHRDFAII MQPSTDNDRV QARLRGIHDT LAAHGLAVRP VHQHEGAATI
AFGRASLRAI AGSDAVTRPT AVICGNDALA LGALLEAQAL GIDVPAQLSI TGFDDVALAR
EIQPPLTTMW VDTDAIGRQA AHALLDALEN GATGPGHAVQ PELRIRESAA APAKTQTQAR
TARGK
|
|---|
| |