Gene Bcen_5736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5736 
Symbol 
ID4096346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand+ 
Start bp276575 
End bp277486 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content66% 
IMG OID638019012 
Productsubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_625578 
Protein GI107028483 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.518221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTTC ATCGCATCCT TCGATCGCTC GCACGCCTGT GCGCCGCCGG TGTGCTGTGC 
GTCGCGGCCG GCACGCCGGC ATTCGCCGCG AAGCTCGTGC TCGGCGCGAA GAACTTCACC 
GAGCAATACG TGCTCGCGGA ACTCACGTCG CAGTACCTGC GCTCGCGCGG CTACGACGTC 
GAAGTCCGCG CCGGGCTCGG CAGTACGCTC GCCCGCAGCG CGCTGGAGAA CGGCCAGTTC 
GACCTGATGT GGGATTACAC GGGCACCGCG GCGCTCGTCT ACAACAAGAT CCAGGACAAG 
CTGTCGCCCG AGGAAATGTA CCGGCGCGTC AAGGCGCTCG ACGTGCCGCG CGGGCTCGTG 
TGGCTCGACG CGTCGCCGCT CAACGACACC TACGCGATCG GCCTGCCGAG CCAGCTCGCG 
CAGGCCACCG GCATCCGGAC GGTGTCGCAG CTCGCCGAGC ACCTGAAGAC CGATCCGGCG 
GCGAAGCATT ACGTGTTCGG CATGGACGCG GAATTCGCGA ATCGCCCCGA TGGCCTCAAG 
CCGCTGCTCG CCGCCTACGG CATGCAGTTC AGCCGCGCGC AACTGAAGCA GATGGACCCG 
GGGCTCGTCT ATACGGCCCT GCACAACAAC CAGTTGAAGA TCGGCCTCGT CTACACGACC 
GACGGACGCG TGAAGGGCTT CGGCATCGTG CCGCTCGAGG ACGACAGGCA CTTCTTCCCG 
CCGTACAACG CGACGCCCGT GGTCCGCAAG GGCACGCTTG AAAGCAATCC GAAGCTCGCG 
ACGCAGCTCA ACGCGCTGTC GGCCGCGCTC GACAACGATG CGATGCAGGC GATGGCCAAG 
GCGGTCGATC TCGATGGCAA ATCGCCGCGC GACGTCGCCG ATGCATTCCT GTGCACCCAC 
CCGCTACCTT GA
 
Protein sequence
MTLHRILRSL ARLCAAGVLC VAAGTPAFAA KLVLGAKNFT EQYVLAELTS QYLRSRGYDV 
EVRAGLGSTL ARSALENGQF DLMWDYTGTA ALVYNKIQDK LSPEEMYRRV KALDVPRGLV 
WLDASPLNDT YAIGLPSQLA QATGIRTVSQ LAEHLKTDPA AKHYVFGMDA EFANRPDGLK 
PLLAAYGMQF SRAQLKQMDP GLVYTALHNN QLKIGLVYTT DGRVKGFGIV PLEDDRHFFP 
PYNATPVVRK GTLESNPKLA TQLNALSAAL DNDAMQAMAK AVDLDGKSPR DVADAFLCTH 
PLP