Gene Bcen_5727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5727 
Symbol 
ID4096337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp266191 
End bp267117 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content67% 
IMG OID638019003 
Productinner-membrane translocator 
Protein accessionYP_625569 
Protein GI107028474 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.923456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCATGCGT TCGCGGCGCA GCGCGCGCCG CGGGCGTCCG TTACCTTCCT CTCCGACACG 
GAAGCCATGA ACGTCTATCT GCTGCAGATC GTCAACGGCA TCGGCGTGGG CATGCTGTAT
TTCCTGCTCG CCGTCGGCCT GTCGATCGTA TTCGGCCTGC TGCGCTTCGT GAATTTCGCT
CACGGCGCGT TCTATCTGCT TGGCGCGTAT CTCTGCTACC AGGCGCTGCA ATGGTCGGCG
AATTTCTGGG TCGCGTTGGC GGTCGTGCCG CTCGTCGTCG GCGCGTTCGC ATGGATCGTC
GAGAAGCTGG TGCTGCGCCA CGTGTACGCG CAGCAGCACG AATTCCACAT CCTCGCGACG
GTCGGCCTCG CGCTCGTGCT GCAGGAGTGC GCGATCCTCG CGTGGGGGCC GCTCGGCGAC
AACGTGCCGC CGCCCGACGC GCTGAACGGC GTCGTGATCT GGGGCGGCTT CGTCTATCCG
AAGTATCGGC TGTTCGTGAT CGCGTTCACG GCCGTGCTCG CCGCGTTGCT GTGGTGGGTG
CTCGAAGGCA CACGGCTCGG CAGTACGGTG CGCGCGGGCA GCGAGTCGAC GGAGATGGTG
TCGCTGCTCG GCATCAACGT GACGCGTGTG TTCAGCCTCG TGTTCGCGCT CGGCGCGGCG
ACGGCCGCGC TGGCCGGCGT GCTCGCCGCA CCGATCCGCG GCGTCGATCC GTTCATGGGG
ATCGAGGCGC TCGGCGTCGC GTTCGTCGTG GTCGTCGTCG GCGGGATGGG GAATTTTCTC
GGCGCGCTCG TCGGCGGGCT GCTGGTCGGC ATCGTGCAGA GCCTGATGAG CACGCTGTGG
CCGGAAGGCG CGCGATTGAT GATCTACGTC GCGATGGCGG CCGTGCTGCT GCTGCGTCCG
AACGGTCTGC TGGGGAGGGC CGCATGA
 
Protein sequence
MHAFAAQRAP RASVTFLSDT EAMNVYLLQI VNGIGVGMLY FLLAVGLSIV FGLLRFVNFA 
HGAFYLLGAY LCYQALQWSA NFWVALAVVP LVVGAFAWIV EKLVLRHVYA QQHEFHILAT
VGLALVLQEC AILAWGPLGD NVPPPDALNG VVIWGGFVYP KYRLFVIAFT AVLAALLWWV
LEGTRLGSTV RAGSESTEMV SLLGINVTRV FSLVFALGAA TAALAGVLAA PIRGVDPFMG
IEALGVAFVV VVVGGMGNFL GALVGGLLVG IVQSLMSTLW PEGARLMIYV AMAAVLLLRP
NGLLGRAA