Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5713 |
Symbol | ampC |
ID | 4096863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 248447 |
End bp | 249616 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638018989 |
Product | beta-lactamase |
Protein accession | YP_625555 |
Protein GI | 107028460 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGATTCA ATGCGACACG CGTCGCCGCG ACCCTGTTCG TCGCCGCATG CGCGACCGCC ACGGCCGGTA GCGCGGCCGC CGTCACGCAG GACGACCTCC ACGACACTGT CACGCGCCAT ATCGCTCCGT TGATGAAGCA GTATGCGATC CCCGGCATGG CGATCGGCAT CGTCGCCGAC GGCAAGCCGC AGGTGTTCGA CTACGGCGTG ATGTCGAAGC AGACCGGCAA GCCGGTGACC GGCGACACGC TGTTCGAGAT CGGCTCGGTC AGCAAGACGC TGACCGCGAC GCTCGCCGCG GACGCGCAAG AGGGCGGCGA ACTGTCGCTC GCGGACCCGG TGGCCAGATA TCTGCCCGAG TTGCAGGGCA AGCCGTTCGG CGTCGTCACG CTGCTTCAGC TCGGCACGCA CACGCCCGGC GGGACGCCGC TGCAGGTGCC GGACAGCATT CGCGACGATG CGGGTCTGAT CCGCTATCTC GATGCGTGGC GGCCCGAGTA TGCGCCGGGC ACGCACCGCA AGTATTCGAA CGTCGCGATC GGCATGCTCG GCTGGCTCAC CGCGAAGGCG ATGCACGAGG ATTTCGCGAC GCTGATGGAG CAGCGGCTCT TTCCCGCGCT CGGGATGACG CACACGACCA TCGACGTGCC CGCCGCGCGC ATGACCGACT ATGCGCAGGG CTACACGAAG GACGGCAAGC CGGTGCGGAT GTCGCAAGGC ATGCTGTGGC AGCCGGCGTA CGGCGTGCGG ACCACGGCGG CCGACCTGCT GCGCTTCGTG CAGGCGAACC TGGGGATGAT CCAGACGGCG CCGCGCCTGC AGCGCGCGAT CGAACGTACG CACACCGGCT ATTTCCGCGC GGGGCCGCTG ACGCAGGACT TGATCTGGGA ACAGTATCCG TACCCGGTCG CATTGCCGAC GCTGCTGGCG GGCAACGCGC CGAAGATGCT GTTCGACGCG GTGCCGGCCA GCGCGATCCA GCCGCCGCTC GCGCCGAACC CCGCGACCTG GATCAACAAG ACGGGCTCGA CCGGCGGCTT CAGCACGTAC GTCGCGTTCG TTCCCGCGAA GCGGATCGGG ATTGTGATGC TCGCGAACGG CAACGTGCCG ATCGAGGACC GCGTGAAGGT CGCCTACCGG ATTCTCGGGT CGCTCGGCGA CGGGCGGTGA
|
Protein sequence | MRFNATRVAA TLFVAACATA TAGSAAAVTQ DDLHDTVTRH IAPLMKQYAI PGMAIGIVAD GKPQVFDYGV MSKQTGKPVT GDTLFEIGSV SKTLTATLAA DAQEGGELSL ADPVARYLPE LQGKPFGVVT LLQLGTHTPG GTPLQVPDSI RDDAGLIRYL DAWRPEYAPG THRKYSNVAI GMLGWLTAKA MHEDFATLME QRLFPALGMT HTTIDVPAAR MTDYAQGYTK DGKPVRMSQG MLWQPAYGVR TTAADLLRFV QANLGMIQTA PRLQRAIERT HTGYFRAGPL TQDLIWEQYP YPVALPTLLA GNAPKMLFDA VPASAIQPPL APNPATWINK TGSTGGFSTY VAFVPAKRIG IVMLANGNVP IEDRVKVAYR ILGSLGDGR
|
| |