Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5710 |
Symbol | |
ID | 4096860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 244583 |
End bp | 245977 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638018986 |
Product | RND efflux system, outer membrane lipoprotein, NodT |
Protein accession | YP_625552 |
Protein GI | 107028457 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTCG TTCGACTCGT GGCCGCGCTG TCCGCGGCGG CCGTCCTGAC CGCGTGCACG AGCGCGCCGG TCGCCACCGT CACCCCGCCG CCGCTGGCCG CGACCTATGC GAACGCGGAT CTCGCGGCCG GCGGCCCGGC CGCCGACACC GGTGCGTGGT GGCATGGCTT CCACGACCCG ATCCTGGACC GGCTGGTCGA CACCGCGCTC GCGAACAACC TCGACCTGCA GGCGGCCGTC GCACGCATCG ACGCGGCCCG CGCGGTACGG ATCGGCGCGG CGTCGCAATG GTTTCCGTCC GTCGACCTGA ATGCCGGTGC CAGCCGTCAG CGGCTGTCCG CATCGCAGGC GTTCCCGACC GATACGCCGA CGACCGGCAA CGCGTTCGAC CTGAATGCGA GCCTCGCATG GGAAATCGAC ATCTTCGGCC GCATCCGCCA GGGTGTGTCG GCAGCCGACG CGGATATCGC ATCCGCGCAA AACGATGCGG CGGCCGTGCG GATCGCGACG ATCGACGAAA CCGTGCGCAC CTACGTGACG GTGCGCGGCC TCGAACAGCG GCTCGCGCTG GTCGAGGCCA ACGCGTTGAG CCAGCGCGGC ACCGAGGAAT CGACACGGCG CCTGTTCGAC GCGGGCGTCG TGCCGATCGC CGACGTCGAC CGCGCCGCCG CGCAGACGGA AACGACGCTG GCCGAGCTGC CTGCGCTGCA ACTGCAGCGG CAGGCCGCGA TCCACCAGCT GTCGATCATC ACCGCGTCGA CACCGCAGGA CATCTATGCG CGGCTCGACC CGCCCGCGCC CGAGCCGGTG TGGACCGCCG CCGCGCCGGG CATCGGCACG CCGGCCGACC TGCTGCGCCG GCGGCCCGAC GTGCGCGCGG CCGAGGCACG CGTCGTCGCG GCCTATGCGC GCATCGGCGT CGCCGAGGCC GACCTGAAGC CGCACCTGCA ACTGATCGGC GTGATCGGTG CGGCGATCGA CGGTTTCTCG GGCGCGTCGC TCGCGCGTTC GCTCGCATGG ATGGCCGGCG CCGGCGCGAG CGCGCCGCTG TTCGACGGCG GCCGGCGCCG CAGTGTCGTC GCGTTGCGGC GCGCGCAGGC CGACCAGGCG CTCGCCGCCT ATCGCACGGC CGTGCTGACG GCCGTCGGCG ACGTCGAGAC GTCGGTGGCC GCGACCGCCC GAAATCACGG CCGGACCGAA CGCCTCGAGC GCGCGGTATC GAATGCACGG GGTGCGTATA CGCAGATCAA CCGGTCGTGG CGCAGCGGCG AATCGGCGTT CATCGATACG CTGGAAGTGC AGCGCGCGCT GCTCGCGGCC GAGGATTCGC TCGCACGGGC GCGCACCGAG GAAACGCTGA GCCGGGTCAG GCTGATGAGT GCGCTGGGGC AGTAA
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Protein sequence | MKFVRLVAAL SAAAVLTACT SAPVATVTPP PLAATYANAD LAAGGPAADT GAWWHGFHDP ILDRLVDTAL ANNLDLQAAV ARIDAARAVR IGAASQWFPS VDLNAGASRQ RLSASQAFPT DTPTTGNAFD LNASLAWEID IFGRIRQGVS AADADIASAQ NDAAAVRIAT IDETVRTYVT VRGLEQRLAL VEANALSQRG TEESTRRLFD AGVVPIADVD RAAAQTETTL AELPALQLQR QAAIHQLSII TASTPQDIYA RLDPPAPEPV WTAAAPGIGT PADLLRRRPD VRAAEARVVA AYARIGVAEA DLKPHLQLIG VIGAAIDGFS GASLARSLAW MAGAGASAPL FDGGRRRSVV ALRRAQADQA LAAYRTAVLT AVGDVETSVA ATARNHGRTE RLERAVSNAR GAYTQINRSW RSGESAFIDT LEVQRALLAA EDSLARARTE ETLSRVRLMS ALGQ
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