Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5698 |
Symbol | |
ID | 4097224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 229466 |
End bp | 231529 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638018974 |
Product | squalene cyclase |
Protein accession | YP_625540 |
Protein GI | 107028445 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1657] Squalene cyclase |
TIGRFAM ID | [TIGR01507] squalene-hopene cyclase [TIGR01787] squalene/oxidosqualene cyclases |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCGCC GCATGAACAA ATCGGCCCCC TCTTCCTGGT CCGCGCTCGA CGCTGCCATC GCCCGTGGAC GCGACGCACT CGTGCGCCTT CAGCAGCCCG ACGGCAGCTG GTGTTTCGAA CTCGAATCCG ACGCGACGAT CACCGCGGAA TACATCCTGA TGATGCATTT CATGGACAGG ATCGACGACG TGCGCCAGGA GAAGATGGCA CGCTACCTGC GCGCGAACCA GCGGCTCGAC ACGCACGGCG CCTGGGATCT GTACGTCGAC GGCGCACCGG ACGTGTCGTG CAGCGTGAAG GCGTACTTCG CGCTGAAGGC GGCCGGCGAC AGCGAACACG CGCCGCACAT GATCCGCGCG CGCGACGCGA TCCTGAAGCT CGGCGGCGCG GCCCGTTCGA ATGTGTTCAC GCGCATCCTG CTCGCGACGT TCGGCCAGGT GCCGTGGCGC GCGGCGCCGT TCATGCCGGT CGAATTCGTG CTGTTCCCGA AGTGGGTGCC GATCTCGATG TACAAGGTCG CGTACTGGGC GCGCACGACG ATGGTGCCGC TGCTGGTGCT GTGCTCGCTG AAGGCGCGTG CGCGCAATCC GCGCAACGTG TCGATCCGCG AGCTGTTCGT CACGCCGCCC GAACAGGAGC GCCACTACTT CCCGCCCGCG CGCGGCATGC GCCGGCTGTT CCTCGCGCTC GACCGCACGA TCCGCCCTAT CGAGCCGCTG CTGCCGAAGC GCTTGCGGCA GCGCGCGATC CGGCATGCGG AAGCGTGGTG CGCGGAACGG ATGAACGGCG AGGACGGGCT CGGCGGCATC TTCCCGCCGA TCGTGTACAG CTACCAGATG ATGCAGGTGC TCGGCTACCC GGACGACCAT CCGCTGCGGC GCGATTGCGA GAACGCGCTG GAGAAGCTGC TGGTCACGCG GCCGGACGGC AGCATGTACT GCCAGCCGTG CCTGTCGCCG GTGTGGGACA CCGCGTGGAG CACGATGGCG CTCGAGCAGG CGCGCGGCGT CGCGGCGCCG GAAACCGGCG ACACGGCTTC CGGCGCACTG CGCGATCTCG ACGGGCGCAT CGCTCGCGCG TACGACTGGC TGGCCACGCG CCAGGTGAAC GACCTGTGCG GCGACTGGAT CGAGAACGCC CCGGCCGATG TCGAACCGGG CGGCTGGGCA TTCCAGTATG CGAACCCGTA CTACCCGGAC ATCGACGACA CGGCGCTCGT CACCGCGATG CTCGATCGCC GCGGCCGCAC GCATCGCGCC GCGGACGGCA CGCACCCGTA CGCGTCGCGC GTCGCACGCG CGCTCGACTG GATGCGCGGG CTGCAATCGC GCAACGGCGG CTTCGCGGCG TTCGACGCGG ACTGCGACCG CATGTATCTG AACGCGATTC CGTTCGCCGA TCACGGCGCG CTGCTCGACC CGCCGACCGA GGACGTATCG GGCCGCGTGC TGCTGTGCTT CGGCGTGACG AAGCGCGCCG CAGACCGCGC GTCGCTCGCC CGCGCGATCG ACTACGTGAA GCGCACGCAG CAGCCCGACG GCAGCTGGTG GGGCCGCTGG GGCACGAACT ACCTCTACGG CACGTGGAGC GTGCTGGCCG GCCTCGCGCT CGCCGGCGAG GACAAGTCGC AGCCCTACAT CACCCGCGCG CTCGACTGGC TGCGCGCGCG GCAGCACGCG GACGGCGGCT GGGGCGAGAC CAACGACAGC TACCTCGATC CGAAGCTGGC CGGCACGAAC GGCGGCGAGA GCACGTCGAA CTGCACCGCG TGGGCGCTGC TCGCGCAGAT GGCGTTCGGC GACTGCGAAT CCGATTCGGT GAAGCGCGGC ATCGCGTATC TGCAGTCGGT GCAGCAGGAA GACGGCTTCT GGTGGCACCG CTCGCACAAT GCGCCGGGCT TTCCGCGCAT CTTCTATCTG AAGTATCACG GCTATACCGC TTACTTCCCG CTGTGGGCGC TCGCGCGTTA TCGGCGGCTG GCAGGGGCGA AGGATGCGGG CGCAACCAGG TCGTGCGCGT CCGGTGCGTC CGCCGCACCC GCAACGGACG ACGCGCTCGC CTGA
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Protein sequence | MIRRMNKSAP SSWSALDAAI ARGRDALVRL QQPDGSWCFE LESDATITAE YILMMHFMDR IDDVRQEKMA RYLRANQRLD THGAWDLYVD GAPDVSCSVK AYFALKAAGD SEHAPHMIRA RDAILKLGGA ARSNVFTRIL LATFGQVPWR AAPFMPVEFV LFPKWVPISM YKVAYWARTT MVPLLVLCSL KARARNPRNV SIRELFVTPP EQERHYFPPA RGMRRLFLAL DRTIRPIEPL LPKRLRQRAI RHAEAWCAER MNGEDGLGGI FPPIVYSYQM MQVLGYPDDH PLRRDCENAL EKLLVTRPDG SMYCQPCLSP VWDTAWSTMA LEQARGVAAP ETGDTASGAL RDLDGRIARA YDWLATRQVN DLCGDWIENA PADVEPGGWA FQYANPYYPD IDDTALVTAM LDRRGRTHRA ADGTHPYASR VARALDWMRG LQSRNGGFAA FDADCDRMYL NAIPFADHGA LLDPPTEDVS GRVLLCFGVT KRAADRASLA RAIDYVKRTQ QPDGSWWGRW GTNYLYGTWS VLAGLALAGE DKSQPYITRA LDWLRARQHA DGGWGETNDS YLDPKLAGTN GGESTSNCTA WALLAQMAFG DCESDSVKRG IAYLQSVQQE DGFWWHRSHN APGFPRIFYL KYHGYTAYFP LWALARYRRL AGAKDAGATR SCASGASAAP ATDDALA
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