Gene Bcen_5692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5692 
Symbol 
ID4097218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp224677 
End bp225582 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content66% 
IMG OID638018968 
ProductLysR family transcriptional regulator 
Protein accessionYP_625534 
Protein GI107028439 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAACC TTGATGCGCT TTTGATTTTT GCCCGTGTCG CCGAAATGGC GAGCTTCACG 
CGTGCGGCTG AAAGCCTCGG AATTCAGAAA GGACGGGTAT CGACGGTCGT CCGCACGCTC
GAACGGGACA TGGGCGTCGC ACTGCTGCAT CGGACCACGC GGCGCGTGCA GCTCACCGAA
GACGGACGCG CGTTCTATGC GCGCGCAACC GACCTGCTCG CGGAAGTGCA GGAATTGCAG
TCGATGTTTT CGGGGCGTGG CGCATCGCTG CGCGGCAGGT TGCGTGTAGA CATGCCCACG
GAGCTGGCGC GCAGCGTCGT GGTGCCGGCG CTGCCGCAAC TGATGGCCGC GCATCCGGAT
CTGGAGCTGG AGCTTTCCAG CACCGACCGG CGTGTCGATC TGGTTCGGGA AGGGTTCGAC
TGCGTGATCC GGCTGGGCCC GATCGCCGAC GAGACGCTGA TTGCCCGGCC GCTGGGCAGG
CTGCGCATGA CGAATGCGGC GAGCCCCGAT TATCTGGCGC GGCATGGCGT GCCGCGTACG
CTCGCCGATC TGCACAGCCA GGGGCACAGG ATGATTCACT ACACGCTGAC GCTCGGCGCG
CGGCATCCCG GCTGGGAATA CCCGGACGGC GACGGCTATG CGTGGCTGCC GTTGCCGAGC
GCGATGCAGG TCAACAGTGT GCAGACCTAT CATGCGGCCG GGCTGGCGGG CATCGGACTG
ATCCAGGCCG GCTATTCGGC GCTCGCGCAT CACATCGAAA GCGGCGCGCT CGTGGAGGTG
TTGCCCGATT TGCGGCCCGA GCCGCTTGCC GCGTCGCTCG TCGTCGCGCA TCGGCGCAAT
CTTTCGCCGC GCGTGCGGGC GTTCATGGAC TGGATCGGGG GCGTGTTGGA GCCGTACCTC
GATTAG
 
Protein sequence
MQNLDALLIF ARVAEMASFT RAAESLGIQK GRVSTVVRTL ERDMGVALLH RTTRRVQLTE 
DGRAFYARAT DLLAEVQELQ SMFSGRGASL RGRLRVDMPT ELARSVVVPA LPQLMAAHPD
LELELSSTDR RVDLVREGFD CVIRLGPIAD ETLIARPLGR LRMTNAASPD YLARHGVPRT
LADLHSQGHR MIHYTLTLGA RHPGWEYPDG DGYAWLPLPS AMQVNSVQTY HAAGLAGIGL
IQAGYSALAH HIESGALVEV LPDLRPEPLA ASLVVAHRRN LSPRVRAFMD WIGGVLEPYL
D