Gene Bcen_5679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5679 
Symbol 
ID4096809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp214022 
End bp214804 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID638018955 
ProductThiJ/PfpI 
Protein accessionYP_625521 
Protein GI107028426 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTACTG CCATCCGACA ATCAGGCGGC GCGTCGAAGA CGTTCGCCCG TGGCCGGTCA 
CCAGGAAACC GCATCATGAG CAAGCGCATC CTTCACGTCG TCAGCAATGT CGCGCACTAC
GCCGATCCGT CGCAACCGAC CGGCCTGTGG CTGTCGGAAC TCACCCATGC CCATCACATC
TTCGCGGCAA GAGGCTATGA GCAGCAGCTC GTGAGCCCGA AAGGCGGCGT GTCACCACTG
GAACCGCGCT CGCTCAAATG GCCGCACGCC GACGCCGCGT CGAAGGCATG GCGCGCCGAC
AAGGCGAACG CGGCGCTGCT CGCGCACACC GCGCGCCCGG ACGAGATCGA TCCGGCCGGC
TTCGACGCGA TTTACTTCAC CGGCGGCCAT GCGGTGATGT GGGACTACCC GGACGATGCG
GGACTGCAAC GGCTCACGCG CGAGATCTAC GAGCACGGTG GCATCGTGTC GTCGGTCTGC
CACGGCTACT GCGGGTTGCT GAATACGAAG CTGTCGAACG GTTCGCTGCT GGTCGCCGGG
CGCCGGATCA CCGGCTACTC GTGGGTGGAG GAAATCCTGG CCGGCGTCGC GAAGAAGGTG
CCGTACAACG TCGAACAGCA GATGCGGGAG CGTGGCGCGC GCTACGAGAA AGCGCTGCTG
CCGTTCACGT CGAACGTCGT CGTCGACGGC CGCATTGTGA CCGGCCAGAA TCCGCAATCG
GCAAAGGCAA CGGCCGAACA GGTCGTCGCG CTGCTGTCAC TCGGCGCGCC GGCGCACGTC
TAA
 
Protein sequence
MCTAIRQSGG ASKTFARGRS PGNRIMSKRI LHVVSNVAHY ADPSQPTGLW LSELTHAHHI 
FAARGYEQQL VSPKGGVSPL EPRSLKWPHA DAASKAWRAD KANAALLAHT ARPDEIDPAG
FDAIYFTGGH AVMWDYPDDA GLQRLTREIY EHGGIVSSVC HGYCGLLNTK LSNGSLLVAG
RRITGYSWVE EILAGVAKKV PYNVEQQMRE RGARYEKALL PFTSNVVVDG RIVTGQNPQS
AKATAEQVVA LLSLGAPAHV