Gene Bcen_5663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5663 
Symbol 
ID4096793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp198094 
End bp199080 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content65% 
IMG OID638018939 
ProductTRAP dicarboxylate transporter, DctP subunit 
Protein accessionYP_625505 
Protein GI107028410 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.62883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCACC GATTCACCGG CTCCCGTACC GCCCTCGCCG TCGCGTTGAT GGCCGGCTTC 
GCGATGTCCG CGCAGGCGCG CGTGTTCCGC TCGGCGGACG TGCACGGCGA CAACTTCCCG
ACCAACATGG CCGTGAAGTT CATGGGCGAC GCGCTGTCGA AGCAGACGGG CGGCAAGGAT
TCGATCAAGG TGTTCGGCAA CAGCGCGCTG GGCTCCGAGA AGGACACCGT CGACCAGGTG
CGGATCGGTG CGATCGACAT GGCGCGCGTG AACGGCGCAT CGTTCAACGA GATCGTGCCG
GAGTCGCTGA TTCCGTCGTT CCCGTTTCTG TTCCGCGACG TCGATCACTT CCGCAAGGCG
ATGTACGGCC CGGCCGGCCA GAAGATCCTC GATGCGTTCA CCGCGAAGGG AATGATCGCG
CTGACGTTCT ACGAGAGCGG CGCGCGCTCG ATCTACGCGA AGCGCCCGGT GCGCTCGCCG
GCCGACATGA AGGGGCTGAA GGTGCGCGTG CAACCGTCCG ACCTGATGGT CGACGAGATC
CGGGCGATGG GCGGCACGCC GACGCCGATG CCGTTCGCCG AGGTGTACAC GGGCCTGAAG
ACGGGCCTCG TCGATGCGGC GGAAAACAAC CTGCCGTCGT ACGAGGAAAC CAAGCATTAC
GAAGTCGCGC CCGATTACTC GGAGACGCAG CACGCGATGA CGCCGGAAGT GCTGGTGTTC
TCGAAGAAGA TCTGGGACAC GCTGTCGCCG CAGGAGCAGG CGGCGATCCG GAAGGCGGCG
GCCGACTCGG TGCCGTACTA CCAGAAGCTG TGGACCGCGC GCGAGGCGTC CGCGCAGCAG
CTGGTGACGA AGGGCGGCGC GAAGATCCTG CCGGCCGCGC AGATCGACCG CGCGGCGTTC
GTGAAGGCGA TGCAGCCGCT GTGGATCAAG TATGAAAAGA CGCCGCAGAT GAAGCAGATC
GTCGACGAGA TCGAGGCCAC CAAGTGA
 
Protein sequence
MKHRFTGSRT ALAVALMAGF AMSAQARVFR SADVHGDNFP TNMAVKFMGD ALSKQTGGKD 
SIKVFGNSAL GSEKDTVDQV RIGAIDMARV NGASFNEIVP ESLIPSFPFL FRDVDHFRKA
MYGPAGQKIL DAFTAKGMIA LTFYESGARS IYAKRPVRSP ADMKGLKVRV QPSDLMVDEI
RAMGGTPTPM PFAEVYTGLK TGLVDAAENN LPSYEETKHY EVAPDYSETQ HAMTPEVLVF
SKKIWDTLSP QEQAAIRKAA ADSVPYYQKL WTAREASAQQ LVTKGGAKIL PAAQIDRAAF
VKAMQPLWIK YEKTPQMKQI VDEIEATK