Gene Bcen_5662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5662 
Symbol 
ID4096792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand- 
Start bp197525 
End bp198097 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content67% 
IMG OID638018938 
Producttripartite ATP-independent periplasmic transporter DctQ 
Protein accessionYP_625504 
Protein GI107028409 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.652959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGCGTC GCACTTCCCT GAACAGCGCG GCGGCCGCGG GCGGGTCGGC CGCCGCCCCG 
GACGGCACGC CGCCCGCGCG GCCGCATGCC GCGTCGCTGC TGCGCTGCGT GAACGACGTG 
CTGTTCCGCG TGCTGGCCGT GATTGCATCG TCGTGTCTCG CGGTGCTCAC GGTGCTGGTG 
TTCTACGCGG TCGTGATGCG CTACGTGTTC GAGAACGCGC CGGATTTCGT CGAGCCGATC 
GCGCTGTTGC TCGTGATCGT GATCGCGATG TTCGGTGCCG CGATGAAGGT GCGCGACGGC 
GGCCATATCG GCCTCGATTC GCTGGTGCGC CGGCTGTCGC CGAAGGCGCG CACGGTGGTC 
ATCGCGATCC AGCACCTGAG CCTGATCGCG TTCGCGATCA TGATCATGAT CGGCTGCGGC 
AGCATGGCCG TCGAGACGAT GGGCGACCGC ATCCCGATCA TCGGGCTGCC CGAAGGCGTG 
CGCTACCTGA TCACGATGCC CGCGGCGGTT GCGATCATCT TCTTCTCGCT CGAGCACCTG 
CTCGCGCTTC GTCGTTCTTC GTCGGGACAA TAA
 
Protein sequence
MTRRTSLNSA AAAGGSAAAP DGTPPARPHA ASLLRCVNDV LFRVLAVIAS SCLAVLTVLV 
FYAVVMRYVF ENAPDFVEPI ALLLVIVIAM FGAAMKVRDG GHIGLDSLVR RLSPKARTVV 
IAIQHLSLIA FAIMIMIGCG SMAVETMGDR IPIIGLPEGV RYLITMPAAV AIIFFSLEHL 
LALRRSSSGQ