Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5661 |
Symbol | |
ID | 4096791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 196168 |
End bp | 197520 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638018937 |
Product | TRAP dicarboxylate transporter- DctM subunit |
Protein accession | YP_625503 |
Protein GI | 107028408 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.795027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTCG CGATCCTGTC CGTCAGTTTT CTGATATTTC TCGTGCTCGG CGTACCCGTG TCGTTCGCGC TCGGCATTGC GTGCGTGCTG ACCTACATGG TCGAAGGCCT GCCGATCGCG ACCGCGATGC AGGCGATGAT CTCGGGGATG AACGCGTTCT CGTTCCTCGC GGTGCCGTTC TTCATCTTCT CTGGCGAACT GATGCTGCAT GGCGGCATCG CCGACCGCAT CCTGCGCTTC GCGCAGGCGA CCGTCGGCCA CTTCCGCGGC GGCCTCGGGA TGGCGAACGT CGTCGCTTGC ACGCTGTTCG GCGGCGTGTC GGGCTCGCCG ACCGCCGATA CGTCGGCGAT GGGCGGCGTG GTGATTCCGC TGATGAAGCG CGAAGGCTAC AGCGCCGCGT ACGCGGTCAA CGTGACGACG CATGCGTCGC TCGCCGGCGC GCTGATGCCG ACGTCGACCA ACATGATCAT CTACGCGTTC GCCGCGCAGG GCATCACCGG GATGCTGCAC GGCCAGCCGG TGAGCGGCGT GTCGATCGGC GACCTGCTGT TCTCGGGGCT CCTGCCGGTG TTGTGGGTGA TGGGCTTCGT GCTCGCCGCC GCGTACTGGC AGGCCGTGCG TCACGGCTAT CCGCGCCGCG AGGACGGTTC GTCCGCGCTG CCGCGGTTTC CCGGCTGGTA TGCGGTGCTG CGCAGCTTCG TCGGCGCGGT GCCGGGGCTG ATGGTGATCG CGATCATCCT GGTGTGCGTC GCGAAGGGCA TCGCCACCGC GACCGAAGCG GCCGCGATCG CCGTCGTGTA CTCGCTGGTG CTGACCGCGG TGGTCTACCG GACGCTGACG GCCGAGAAGC TGCGCCGCGC GCTGTCGCAT GCGGCACGCA CGACGGGCGT CGTGCTGCTG CTGATCGCGG TGTCCAACAT GCTGCGCTTC CAGATGTCGT ACCTGGAGAT TCCCGATGCG ATCGAAGGGC TGCTGAAGCA GTCGACCGCG GCGCCGTGGC TGATGCTGCT GTACATCAAC ATCATCCAGG TGTTCCTCGG CACGTTCGTC GACATGGCCG CGCACATCCT GATCACGACG CCGCTGTTCC TGCCGATCGC GATGGCATGC GGCGTCGGGC CGGTGCAGTT CGGGATCATG CTGCTGCTGA ACTGCTCGCT CGGCCTCGTG CACCCGCCGA TCGGGTCGGT GCAGTTCGTC GGCTGCGCGA TCGGCAACGT GTCGATCGGC GAGACGACGA AGATGGCGTG GCCGTACTAC CTCGCGATCT TCAGTGCGAT CAACATCGTC ACGTACATGC CGTTCTTCTC GACGTGGCTG CCGAGCCTGA TCAGCGGGCA CGCGGTGTTC TGA
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Protein sequence | MELAILSVSF LIFLVLGVPV SFALGIACVL TYMVEGLPIA TAMQAMISGM NAFSFLAVPF FIFSGELMLH GGIADRILRF AQATVGHFRG GLGMANVVAC TLFGGVSGSP TADTSAMGGV VIPLMKREGY SAAYAVNVTT HASLAGALMP TSTNMIIYAF AAQGITGMLH GQPVSGVSIG DLLFSGLLPV LWVMGFVLAA AYWQAVRHGY PRREDGSSAL PRFPGWYAVL RSFVGAVPGL MVIAIILVCV AKGIATATEA AAIAVVYSLV LTAVVYRTLT AEKLRRALSH AARTTGVVLL LIAVSNMLRF QMSYLEIPDA IEGLLKQSTA APWLMLLYIN IIQVFLGTFV DMAAHILITT PLFLPIAMAC GVGPVQFGIM LLLNCSLGLV HPPIGSVQFV GCAIGNVSIG ETTKMAWPYY LAIFSAINIV TYMPFFSTWL PSLISGHAVF
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