Gene Bcen_5649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5649 
Symbol 
ID4096588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp183015 
End bp184610 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content72% 
IMG OID638018925 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_625491 
Protein GI107028396 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID[TIGR01733] amino acid adenylation domain
[TIGR03098] acyl-CoA ligase (AMP-forming), exosortase system type 1 associated 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0472962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCAT TGATCAGCAT CGCCGACCTG CTCGAACACG GCGCCGAGCG CTGGCCGCAT 
CATCCGGCGT ATGCCGACGG CGGCGGCACC CTGACTTACG ATCAGCTCGC CCGCGCGGTC
CGGCGCGCCG CCGCCGTGCT CGCGGCGCGC GGCGTGCAGC CCGGCGAACG CGTCGCGATC
TACGCGCCGA AGCGCGTCGA AACCGTGGTC GCGATGCTCG CGGCCAACGC ACTCGGCGCG
ATCTTCGTAC CGGTCAATCC GCAGTTGAAG GAAGCGCAGA TCGAACACAT CGTCGCCGAC
AGCGGCGCCG CGCTGTTCGT GACCGGCGCG CAGCGGCTCA AGCGCCTGCC GGCGCTCGCC
GCGCTCGTCG GCGCGCGCAC GCTGCTGATC GAGGAGCTGG CCGACGCGAT CGAGTCGCCG
GGCACCGATA CGCCGGCATC AGCATCGGCA GCGGCAGCGG CCCCCGCCGG CCGCCCGGTC
GACGACGATC CGGCCGCGCT GCTCTACACG TCCGGCTCGA CCGGCAAGCC GAAGGGCGTC
GTCGTGTCGC ATCGCAACCT GGTGTCCGGC GCGTTCAGCG TCGCGGCGTA CCAGCGGCTC
GCCGCCGACG ACGTCGTGCT CGGCGTGCTG CCGCTCAGCT TCGACGCGGG CCTGAGCCAG
CTCACGACCG CGCTGGCGTC CGGCGCGTGC TACACGCCGC TCGACTTCCT GCAGCCGGCC
GAGGTGCCGC GCCATTGCGA CGCGTTCGGC GTGACGTCGA TCACCGGCGT GCCGCCGCTG
TGGATGCAGA TCGCGTCGGC CGGCTGGAGC GACACCGCAC GCACGCGGCT CCGCCGCTTC
GCGAACACCG GCGGCCATCT CGCGACGCCG CTGCTGCACC GCCTGCAGGC GCTGTTCACG
CAGGCTTCGC CGTACCTGAT GTACGGGCTG ACCGAGGCAT TCCGCTCGAC TTACCTGGCG
CCGGCCGACG CGGCGCTGCG CCCGACGTCG ATCGGCAAGG CCGTGCCGAA CGCGGAGATC
CTCGTGCTGC GCGCGGACGG CAGCGAATGC GCGGCCGACG AACCCGGCGA GCTCGTGCAC
CGCGGCGCGT TCGTCACGCT CGGCTACTGG AACCGGCCCG AGCTGACCGC GCAGCGCTTT
CGTCCGCTGC CGCGCCGGCA CGGCGAGATT CCGCGCCCGG ACGTCGCCGT GTGGTCGGGT
GACATCGTGC GGCGCGACGC GGACGGCTAC CTGTACTTCG TCGCGCGCGG CGACGACATG
ATCAAGACCT CCGGCTATCG CGTGAGCCCG ACCGAGGTCG AGGACGTGCT GTTCGCGCTG
CCGCACATCC GCGAGGCCGC GGTATTCAGC GTCCCGCACC CGGCGCTCGG TGAAGCGATC
GCCGCGTGCG TCGTGTCGAC GCTCGACGCC GACGCGTGCC GCGCCGACAT CGCCCGCGCA
TGCCGCGACG CGTTGCCCAC CTACATGAAC CCGCTCGTCG TCGAGCCCCT GCCGACGTTG
CCGCGCAACC CGAACGGCAA GATCGACCGA CCCGCATTGA AAGCGCAGTA TCGCGACGCG
TTCGCGCGCC CGAACCTCGA GGAGACCGCA GCATGA
 
Protein sequence
MNALISIADL LEHGAERWPH HPAYADGGGT LTYDQLARAV RRAAAVLAAR GVQPGERVAI 
YAPKRVETVV AMLAANALGA IFVPVNPQLK EAQIEHIVAD SGAALFVTGA QRLKRLPALA
ALVGARTLLI EELADAIESP GTDTPASASA AAAAPAGRPV DDDPAALLYT SGSTGKPKGV
VVSHRNLVSG AFSVAAYQRL AADDVVLGVL PLSFDAGLSQ LTTALASGAC YTPLDFLQPA
EVPRHCDAFG VTSITGVPPL WMQIASAGWS DTARTRLRRF ANTGGHLATP LLHRLQALFT
QASPYLMYGL TEAFRSTYLA PADAALRPTS IGKAVPNAEI LVLRADGSEC AADEPGELVH
RGAFVTLGYW NRPELTAQRF RPLPRRHGEI PRPDVAVWSG DIVRRDADGY LYFVARGDDM
IKTSGYRVSP TEVEDVLFAL PHIREAAVFS VPHPALGEAI AACVVSTLDA DACRADIARA
CRDALPTYMN PLVVEPLPTL PRNPNGKIDR PALKAQYRDA FARPNLEETA A