Gene Bcen_5627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5627 
Symbol 
ID4096681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand- 
Start bp159528 
End bp160490 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content65% 
IMG OID638018903 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_625469 
Protein GI107028374 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00235239 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTCA TCAGGAAGCT GGCGGCCGGC GCGATCGTCG CCGCGGCGAC GGTGCTGGCA 
GGCGGCGCGC ACGCGCAGCA AAAGCCGATC ACGCTCGGGT TTTCGCAAGT CGGCGCGGAA 
AGCGCCTGGC GCACCGCGAA TACCGTATCG GTGAAGGGCG CGGCGAAGGA CGCCGGCATC 
AACCTGAAGT TTTCCGACGC CCAGCAGAAG CAGGAGAACC AGATTCGCGC GATCCGCTCG 
TTCATCGCGC AGAAGGTCGA CGTGATCGCG TTCTCGCCGG TCGTCGAATC GGGCTGGGAG 
CCGGTGCTGA CCGAAGCGAA GGCCGCGCAT ATCCCGGTGA TCCTGACCGA CCGCGGGGTC 
GACGTGAAGG ACCCGTCGCT GTACGTGACG ATGATCGGCT CCGACTTCCT CGAGGAAGGG 
CGGCGCGCCG GCCACTGGCT GGAAGAGCGC TACAAGAACG ACGCAGGCCC GATCAACATC 
GTCGAGCTGC AGGGCACGGT CGGCTCCGCG CCGGCCAACG ACCGCCGCGC GGGCCTGCTC 
GAAGTAATCA AGAACAATCC GAAATTCAAG GTGATCGCGT CGCAGAGCGG CGACTTCACG 
CTCGCCGGCG GCAAGCAGGT GATGGAAGCG TTCGCGAAGA CCTACGGCAA GCAGATCAAC 
GTCGTCTACG CGCACAACGA CGACATGGCG CTCGGCGCGA TCCAGGCGAT GGAAGAAGCC 
GGCATCAAGC CCGGCAAGGA CGTGAGCGTC GTGTCGTTCG ACGCGACGAA GGGCGGCTTC 
CAGGCGATGG TCGCGGGCAA GATCAACGTC GACGTCGAAT GCAGCCCGCT GCTCGGCCCG 
CAACTGATGA GCGCGGTGAA GGACGTCGTC GCCGGCAAGC AGTTGCCCAA GCGCATCGTG 
ACCAACGAGA CGGTGTTCCC GATGAACGTC GCGGCGCAGG TGCTGCCGAC CCGCAAGTAC 
TGA
 
Protein sequence
MTFIRKLAAG AIVAAATVLA GGAHAQQKPI TLGFSQVGAE SAWRTANTVS VKGAAKDAGI 
NLKFSDAQQK QENQIRAIRS FIAQKVDVIA FSPVVESGWE PVLTEAKAAH IPVILTDRGV 
DVKDPSLYVT MIGSDFLEEG RRAGHWLEER YKNDAGPINI VELQGTVGSA PANDRRAGLL 
EVIKNNPKFK VIASQSGDFT LAGGKQVMEA FAKTYGKQIN VVYAHNDDMA LGAIQAMEEA 
GIKPGKDVSV VSFDATKGGF QAMVAGKINV DVECSPLLGP QLMSAVKDVV AGKQLPKRIV 
TNETVFPMNV AAQVLPTRKY