Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5626 |
Symbol | |
ID | 4096680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 157953 |
End bp | 159467 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638018902 |
Product | ABC transporter related |
Protein accession | YP_625468 |
Protein GI | 107028373 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000841006 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAGTC CGCCGGTGGT CGAGATGATC GGCATCGACA AGTCGTTTCC GGGCGTCAGC GCGCTGCAGC GCGTGGACTT CCGGTTGTTT CCGGGCGAGA TCCACGCGCT GATGGGCCAG AACGGCGCGG GCAAGTCGAC GCTGATCAAC GTGCTCACCG GCGTGCATGC GCACGATGCG GGCGAGATTC GCGTCGGCGG CGCGCCGGTG AATTTCGCCG CGCCGCGCGA GGCCGAGGCG GCCGGCATCC AGACGCTCTA CCAGGAAGTG AACCTGTGCG CGAACCTGTC GGTCGCGGAG AACATCTTCG CGGGCCGGCA GCCGATGCGG CGCGGCGCGA TCGACTGGAA GACGATCCAT GCGCGCTCGC GCGACGCGCT CGCCGAACTC GACCTGGCGC TCGACGTCAC GCGTTCGCTC GATTCGTATC CGATCGCGGT ACAGCAGATG GTCGCGATCG CGCGTGCGGT GTCGGTCGAC GCGCGCGTGC TGATTCTCGA CGAACCGACC TCGAGCCTCG ACGACGGCGA GGTCGCGCGC CTGTTCGACG TATTGCGCCG GCTGAAGGCG TCGGGCATCG CGATCCTGTT CGTCACGCAT TTTCTCGAGC AGACCTATGC GGTGTCCGAC CGCATCACCG TGATGCGCAA CGGCGAGCGC GAAGGCGAAT ACCTCGCGCG CGACCTGCCG GTCGACGTGC TGGTCGCGAA GATGACCGGC CGCGAGCGCA TGTCCGAGAC GCTGCAGGCG GGCGCCGCGG CGGTCGAGCG TGACACCGCG ACCACCGCGC CGTTCCTGTC GATGCAGCAG GTCGGCCGGC GCGGGATGAT GAGCGCGCTC GATCTCGACG TGCGCCCCGG CGAGATCGTC GGGCTGGCCG GGCTGCTCGG CTCGGGCCGC ACCGAGACCG CGCAACTGGC GTTCGCCGCC GCGCGCCCGG ATACCGGCGC GATCGAGATC GACGGCGCGC GCAAGCGGCT CGCGTCGCCG CACGACGCGG TGCGCAGCGG CATCGCGTAC TGCCCGGAAG ACCGCAAGAA AGAGGGCATC GTCGCGGCGC TGTCGATCCG CGAGAACATC GTGCTCGCGC TGCAGGCGCG GCGCGGCTGG TGGCGGCTGA TCGGGCGGGC GCGCCAGCGC GAGATCGCCG ACACGTACAT CGCCCGGCTC GGCATCAAGG CGCGCGACGC GGAGCAGCCG ATCGGGCTGC TGTCGGGCGG CAACCAGCAG AAGGTGCTGC TCGCGCGCTG GCTCGCGACG GACCCGAAGC TGCTGATTCT CGACGAGCCG ACGCGCGGCA TCGACGTCGC CGCGAAGTTC GACATCATGG AGCGCGTGCT CGCGCTGTGC GCGCAGGGGC TCGCGATCCT GTTCATCTCG TCGGAGATCG GCGAGGTCGT GCGCGTGAGC CACCGGATCG CGGTGCTGCG CGACCGCCGC AAGGTCGCGG AGCTGAGCGG CGCCGATGCG TCCGAGGAGC AGGTTTACCG GTTGATCGCG GGAGGCCAGT CATGA
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Protein sequence | MQSPPVVEMI GIDKSFPGVS ALQRVDFRLF PGEIHALMGQ NGAGKSTLIN VLTGVHAHDA GEIRVGGAPV NFAAPREAEA AGIQTLYQEV NLCANLSVAE NIFAGRQPMR RGAIDWKTIH ARSRDALAEL DLALDVTRSL DSYPIAVQQM VAIARAVSVD ARVLILDEPT SSLDDGEVAR LFDVLRRLKA SGIAILFVTH FLEQTYAVSD RITVMRNGER EGEYLARDLP VDVLVAKMTG RERMSETLQA GAAAVERDTA TTAPFLSMQQ VGRRGMMSAL DLDVRPGEIV GLAGLLGSGR TETAQLAFAA ARPDTGAIEI DGARKRLASP HDAVRSGIAY CPEDRKKEGI VAALSIRENI VLALQARRGW WRLIGRARQR EIADTYIARL GIKARDAEQP IGLLSGGNQQ KVLLARWLAT DPKLLILDEP TRGIDVAAKF DIMERVLALC AQGLAILFIS SEIGEVVRVS HRIAVLRDRR KVAELSGADA SEEQVYRLIA GGQS
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