| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5625 |
|---|
| Symbol | |
|---|
| ID | 4096679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | - |
|---|
| Start bp | 156913 |
|---|
| End bp | 157956 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638018901 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_625467 |
|---|
| Protein GI | 107028372 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00592048 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGGC TACGCACGCT GTTTCGTCAT TCGCTCGCGT GGCCGGTGCT GACGCTCGCG
CTGCTGTTCG CGCTGGATGT CGCGTATCGT CCCGGCTTCC TGTCGATCGC GCTGCTCGAC
GGCCACCTGT TCGGCGCGCC GATCGACATC CTGAACCGTG CGGCGCCGCT CGTGATCGTG
TCGCTCGGGA TGACGCTCGT GATCGCGACG CGCGGGATCG ACATCTCGGT CGGCGCGATC
GTCGCGATCG CCGGCGCGGC GGCCGCGACC GTGCTCGAGG CGGACCCGTC GCAAGTCGGC
ACGGCGCTGG CCGCCGCGCT CGGCGTCGGG CTGCTGGCCG GTGCGTGGAA CGGGCTGCTG
GTCGCGTTCG TCGGGATGCA GCCGATCATC GCGACACTGA TCCTGATGGT GGCCGGCCGC
GGCGTCGCGC AACTGCTGAC CGGCGGCCAG ATCATCCCGA TCGGCGCGCC CGGCTACCTC
GCGCTCGGCG GCGGCTATCT GGCGACCGTG CCGTGCGCGG TGTGGATCGC GCTCGCGACG
ATCGGCGCGA CCGCGCTGCT GGTGAACCGT ACGGCGCTCG GGCTGTTCAT TCGGGCGATC
GGCGTGAACC CGGTCGCGAC GCGGCTCGTC GGGCTGCGCT CGGGTGCGGT CGTGTTCGGC
GTGTATCTGT GCTCGGGCGT GATGTCGGCG CTCGCGGGTA TCCTCGCGAG CTCGAACGTG
CGCAGTGCCG ACGGCAACAA CGCGGGGCTG CTGCTCGAAC TCGACGCGAT CCTCGCGGTG
ACGCTCGGCG GCACGTCGCT GCTCGGCGGC CGCTTCAGCC TCGCGGGCTC GGTGCTCGGC
GCGCTGATCA TCCAGACGCT CACCTACACG ACCTATTCGA TCGGCGTGCC GCCGGAGGCG
ACGCTCGTCG TCAAGGCGGT CGTCGTGATC GTCGTGACGC TGATCCAGTC GGACGCGGCA
CGCGCGCTGC TCGTGCGGCA CGCGTCGCGG CTGCTGCCTT CCGCGCGATC GCGCGCCACC
ACCACCGGAG CGACGCCGCG ATGA
|
|---|
| Protein sequence | MMRLRTLFRH SLAWPVLTLA LLFALDVAYR PGFLSIALLD GHLFGAPIDI LNRAAPLVIV
SLGMTLVIAT RGIDISVGAI VAIAGAAAAT VLEADPSQVG TALAAALGVG LLAGAWNGLL
VAFVGMQPII ATLILMVAGR GVAQLLTGGQ IIPIGAPGYL ALGGGYLATV PCAVWIALAT
IGATALLVNR TALGLFIRAI GVNPVATRLV GLRSGAVVFG VYLCSGVMSA LAGILASSNV
RSADGNNAGL LLELDAILAV TLGGTSLLGG RFSLAGSVLG ALIIQTLTYT TYSIGVPPEA
TLVVKAVVVI VVTLIQSDAA RALLVRHASR LLPSARSRAT TTGATPR
|
|---|
| |