Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5607 |
Symbol | |
ID | 4096835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 129949 |
End bp | 130890 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638018883 |
Product | extracellular solute-binding protein |
Protein accession | YP_625449 |
Protein GI | 107028354 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGATGC AGCGATTCTG GCGTGCGCTC GCGCTCGCGG GCCTGCTTGC GACGGGTGCG GCCGCGCGTG CGGACGATGC GCCGTCGACG CCGCCGCGCG TCGAGCCGTT CGCGCCGGCC CAACTGACCG GCACGCTCGC GAAGGTGCGC GGCAGCGGCA CGATCGCGCT CGGCTATCGC GACGCGTCGA TCCCGTTTTC GTACCTGAAT GCGCGCAACC AGCCGATCGG CTATTCGATC GAGCTGTGCA AGGCGCTCGT GGCGTCGATC GAGGATGCGA TCAACCAGAG CCTGACGATC CGCTGGGTGC CGGTCACGTC CGACAACCGC ATCGACGCGG TGGTCAGCGG CAAGGTCGAT CTGGAATGCG GCTCCACGAC CAGCAACCTC GAGCGCCAGA AACGCGTGGC GTTCTCGCCG ATCTTCTTCG TGGCCGGCAC GAAGGTGATG GTGAAACGCG GCGCGCCGAT CCGCTCGTTC CGCGATCTCG CGGGCAAGAA AGTCGCGGTG ACGGCCGGCA CGACCAACGA GAAGGCGCTG CGCGACCTGA ATGACAAGTT CCGGCTCGGG GTCCAGCTAC AGGTGGTGCC GGACCATGCG CAAGGCTTCG CGCTCGTCGC GAACGGCAGC GCCGACGCGT TCGCGACGGA CGACGTGCTG CTGTACGGCC TGATCGCCGA GAATGCGAGC AAGGGCGGCC AGTACGACGT GGTGGGCGAT TTTCTATCGT ACGACCCGTA CGGCATCATG TTCCGCAAGG ACGATCCGCA ACTCGCGCAG ATCGTGAAAA GCACGTTCCA GGAGTTGGCC GCCGACGGCG AGATCGCACG TCAGTACAAG CGCTGGTTCC TGCGCCCGCT TCCGTCGGGC TTGAGTCTGA ACCTGCCGAT GAGCCCGCAA CTGGAGACCA TCATCGAGGC GATCGGCGTC AACGCGAATT GA
|
Protein sequence | MKMQRFWRAL ALAGLLATGA AARADDAPST PPRVEPFAPA QLTGTLAKVR GSGTIALGYR DASIPFSYLN ARNQPIGYSI ELCKALVASI EDAINQSLTI RWVPVTSDNR IDAVVSGKVD LECGSTTSNL ERQKRVAFSP IFFVAGTKVM VKRGAPIRSF RDLAGKKVAV TAGTTNEKAL RDLNDKFRLG VQLQVVPDHA QGFALVANGS ADAFATDDVL LYGLIAENAS KGGQYDVVGD FLSYDPYGIM FRKDDPQLAQ IVKSTFQELA ADGEIARQYK RWFLRPLPSG LSLNLPMSPQ LETIIEAIGV NAN
|
| |