Gene Bcen_5573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5573 
Symbol 
ID4097178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp92949 
End bp94214 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content71% 
IMG OID638018849 
Productpoly(3-hydroxybutyrate) depolymerase-like 
Protein accessionYP_625415 
Protein GI107028320 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3509] Poly(3-hydroxybutyrate) depolymerase 
TIGRFAM ID[TIGR01840] esterase, PHB depolymerase family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.95415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTCA CCCCCGTTCC GCCGGGCGCC GCCCTTCGGT TGCCGCGGCA CCGGCAGCAC 
GAACCTTGCT TCGCGCCCGT TCGACTTCCA TCCGACGGTG GAGTCGGCCG CCTCTTCCCG
TCACGGCCGG CCGCCGGCAC GAAACTGCAC ATGCCCAGGA AGAAATCCAG CCTCTGGCTG
CGGCATCTCG AACTGTTTTC CATCGCGACC GGTGCGCGGC CGAAGAAGCG CGCCGGCAAG
CCGCGACCGG CCGCCCCAAA AGCCGCCAAG AAGGTCGTTC AACGCACCAT CAAGCCGGCC
GTCGCCGCCC CTGCCGCCAA ACGAACGGGC GCCGCGCCCG CCGCACGCGC GCCATCGGTC
GAGCCGCCCG GCACCTGGCT GCGCTCGTTT CATTCCGCCG GCCCGAGCGC CGGCCGGCTC
GTGAACCATC TTGCGTACGC GCTGTATCTT CCCGCCGCAC CTGCCAAAAC AGCGGGCATG
CCGGCGGTCG TCATGCTGCA CGGCTGCAAG CAGACCGCCG AATCGTTCGC CGCGGGCACG
CGCATCTGCC GTCTGGCCGA GCGCGCGGGG TTCGCCGTGC TGTTTCCCGA ACAGGCCAAG
ACGACCCATG CGCACCGCTG CTGGCACTGG CATGGCGACG CGACCGAGTC CGAAGCCGCG
GCCGTCGCGT CGCTGGTCGA CGCCATCGTG CGGCGCCACG GCTTCGATCG CGACCGGATC
TACGTGGCCG GCCTGTCCGC CGGCGCCGGG CTCGCCGCGG CGCTGGCGCT CCGGTATCCC
GACCGTTTCG CGGCCGTCGG CCTGCACTCC GGCCCGGCCA TCGCGCCGCC GTCGTCGACG
ATGGCCGCGA TGAGCCTGAT GCGTCGCGGG CTCCGCGACG ATCCGGTCGC CGCGCTCGAC
GCGTGCGCCG ACGTCGCGTC CTATCCCGGC ATGCCGGCCC TCGTCATCCA TGGCGCGCTC
GATACGGTCG TGACCGACCG GAACGCGACG CAGCTCGGCA TCGCGTTCGC GCGGCTCAAC
CGGCTCGTCG ACGAACACGG GGCGATCCGC ATCGGCGAGC AACGCAGCTA CGCGCAGGAC
GATGCGGACT ACATCGATTA TCTGAAGGGC GGCCGGCTGG TCGTCAGGGT GTGCATCGTC
CGCCGGCTGC CGCATGCGTG GAGCGGCGGA GACCCGAGCG AGCCGTTCCA TTCCGCCAAG
GGGCCGGACG CGACCGCGAT GTTCTGGCAT TTCTTTCGTC GTCAGCGCCG CAAGCGATTG
GCGTGA
 
Protein sequence
MRVTPVPPGA ALRLPRHRQH EPCFAPVRLP SDGGVGRLFP SRPAAGTKLH MPRKKSSLWL 
RHLELFSIAT GARPKKRAGK PRPAAPKAAK KVVQRTIKPA VAAPAAKRTG AAPAARAPSV
EPPGTWLRSF HSAGPSAGRL VNHLAYALYL PAAPAKTAGM PAVVMLHGCK QTAESFAAGT
RICRLAERAG FAVLFPEQAK TTHAHRCWHW HGDATESEAA AVASLVDAIV RRHGFDRDRI
YVAGLSAGAG LAAALALRYP DRFAAVGLHS GPAIAPPSST MAAMSLMRRG LRDDPVAALD
ACADVASYPG MPALVIHGAL DTVVTDRNAT QLGIAFARLN RLVDEHGAIR IGEQRSYAQD
DADYIDYLKG GRLVVRVCIV RRLPHAWSGG DPSEPFHSAK GPDATAMFWH FFRRQRRKRL
A