Gene Bcen_5545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5545 
Symbol 
ID4096560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp64282 
End bp65244 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content65% 
IMG OID638018824 
ProductAraC family transcriptional regulator 
Protein accessionYP_625390 
Protein GI107028295 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.7737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTGA CGATCCTGGC CCTCGAGGGT CTGTTCGACA CCGGGCTGAC GGTACTGCTG 
GATACCTTCG CGATGGCCAA CGAACTAGCT GCTGCCCAAG GCTTCGCCGC GCCGCCCTTC
GACGTGACGG TGGCGGGCGT GCGCAAACGC GTTCGCACTG CGCATGGACT GTCGATGCTG
GTGGAACCGG CCAGCAGCGT GCGTCGCCCG GACTGGGTGG CCGTGCCCGC GCCCGGTATC
AGGGAGCCGG AGCGCCTGAT CGAGACGCTG CAGCGTCGGG ACGTGTGCGA TGCGATGGCG
CACCTTCGTG CGTGGCATGC CGACGGCGTC GGCGTCGCCG CCGCTTGTAT CGGTACGTTC
TTGCTGGCCG AAGCCGGGCT GCTGGATCAT CGCGAGGCGA CGACCACCTG GTCGCTGTCG
CCTTTCTTCC GTCAACGTTA TCCGGCAGTC GATCTGAACG ATTCGCGCAT GGTCGTCGCC
GCGGATCGCG TGGTCACGGC AGGATCGGCC ATGGGCCATC TCGACCTGGC GCTGTGGTTG
CTACGTCAGG CCAGTCCCGA ACTGGCCACG CTCGTGGCCC GCTTCATGCT GATCGACAAG
CGTTCGTCGC AGGCCGAATA CATCATTCCG GATTACCTTG CACACGCCGA TCCATTGATC
GCGCGATTCG AGCGCTGGGC CCGCGAGCAT CTTTCCCTCG GTTTCTCGCT TCAGACAGCG
GCGGCTGCAT TGGCCGTGGG ACCACGCACG TTGCAGCGCC GTACCGAGGC GGTACTCGGG
AAGTCGCCCT TGGCGTTCTT CCAGGATCTC CGAATCGAAC GGGCGCAGAA CCTCGTGTCG
ATGGGTTACG ACCTGGAGAC GATCGCAAGC GAAGTGGGTT ACGCGGATTC GGCGACGTTG
CGGGCCTTGT TGCGCCGCAG GCTCGGCCGT GGGGTGCGGG AGTTGCGTGC CGACAATCGG
TAG
 
Protein sequence
MRLTILALEG LFDTGLTVLL DTFAMANELA AAQGFAAPPF DVTVAGVRKR VRTAHGLSML 
VEPASSVRRP DWVAVPAPGI REPERLIETL QRRDVCDAMA HLRAWHADGV GVAAACIGTF
LLAEAGLLDH REATTTWSLS PFFRQRYPAV DLNDSRMVVA ADRVVTAGSA MGHLDLALWL
LRQASPELAT LVARFMLIDK RSSQAEYIIP DYLAHADPLI ARFERWAREH LSLGFSLQTA
AAALAVGPRT LQRRTEAVLG KSPLAFFQDL RIERAQNLVS MGYDLETIAS EVGYADSATL
RALLRRRLGR GVRELRADNR