Gene Bcen_5536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5536 
Symbol 
ID4096551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp53704 
End bp55032 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content65% 
IMG OID638018815 
Productmajor facilitator transporter 
Protein accessionYP_625381 
Protein GI107028286 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAATCG ACGCGGCCTG CAACCCGGGC GACCTCGCGG CCCCGGCATC GGCGCACGAT 
CTCGCCCAGG AGGACCGGAT CTTTCGTCGG CTCGCCGTGC AAATTCTCCC GATCCTGATG
TTCGCGTACG TCACGTCGTA CATCGATCGC GTGAACGTCA GCTTCGCCAA ATTGCAGATG
AGCGAGCATC TGGGCTTTTC GGACGCGGTG TTCGGCTTCG GTGCAGGGAT ATTCTTTCTC
GGTTACGTGA TCTTCGAGGT GCCGAGCAAC ATGCTGCTGG TGCGCGTCGG GCCGCGCCGC
TGGATCACGC GGATCGTCGT GTCGTGGGGC GTCGTGTCGG GATTGACGGC GTTCGTGTCC
ACGCCGATGC AGTTCTACGT GATGCGCTTT CTGCTCGGCG TCGCCGAGGC CGGCTTCATC
CCGGCCATCG TGCTCTACAT GGCCCGTTCG TTCCCGGGGC GGCGGCGCGC GCGAATCCTG
TCGATGTTTT ATGCGGCGCT CGCGCTGGCC GGGTTGATCG GCTCGCCGTT GACCGGCTTC
ATCCTGCAGT ATTTCGACGG GGCGATGCAG ATCCCGGGCT GGAAATGGAT CTTCATTCTC
GAGTCGCTGC CCGCATTCGT GGCTGCGCTG TATGTATGGA AGGGCCTCGA CGACGACGTC
ACGCGCAGCG AGCGTTTCTC GCAAGCGGAG CGCGCCGTCC TGGCACGCGT GCTGGCGGAG
GATCGTGCGA CGACCGAGTC GGTCAATCAC CGCGGCCTGT TCTCGAACTG GCTCGTGTGG
GCGTTCTGCG TGATCTACTT TCTCGACGTG TTCGCGATTT ACGGCTATAC ATTCTGGGCG
CCGACGATGA TCAAGCAGAT GGGCATCGGC AGCGATTTCG TCATCGGCTT GCTCGCCGCG
CTGCCGAATG CGGTGGCCGT GGTCGTGATG GTCCTGTTCG GACGCAGCGC GGACCGGTGC
GGCCGGCAGC GGCTGCACGT CGCCGCGCTT TTGCTGATGG GCGCGACCGG GCTCGGGCTG
TCGGTCGTCT GGCACGATCA GCTGTGGCTC GGCATGTTCG CCCTCTGCAT CGCGAACGCG
GGGCTCATCT CGTTTCCGCC GCTGTTCTGG AGCATGCCGA CCGCGGCGCT CGGCACCGCG
TCGGTATCGA TGGGCATCGC GGTGATCAGC TCGTTCGGGA ACCTCGGCGG CTTCTTCGGG
CCCTATGCGG TCGGCTACCT GAAGCAGGCG TCCGGCAGTC TTGCCGCGCC GCTGTTCGTG
ATGGTCGGGT GCCTGTTGCT GGGCATCGTC CTCACGATGC TGCTGCCGGC GCGGCTCGTC
GACCGGTAA
 
Protein sequence
MEIDAACNPG DLAAPASAHD LAQEDRIFRR LAVQILPILM FAYVTSYIDR VNVSFAKLQM 
SEHLGFSDAV FGFGAGIFFL GYVIFEVPSN MLLVRVGPRR WITRIVVSWG VVSGLTAFVS
TPMQFYVMRF LLGVAEAGFI PAIVLYMARS FPGRRRARIL SMFYAALALA GLIGSPLTGF
ILQYFDGAMQ IPGWKWIFIL ESLPAFVAAL YVWKGLDDDV TRSERFSQAE RAVLARVLAE
DRATTESVNH RGLFSNWLVW AFCVIYFLDV FAIYGYTFWA PTMIKQMGIG SDFVIGLLAA
LPNAVAVVVM VLFGRSADRC GRQRLHVAAL LLMGATGLGL SVVWHDQLWL GMFALCIANA
GLISFPPLFW SMPTAALGTA SVSMGIAVIS SFGNLGGFFG PYAVGYLKQA SGSLAAPLFV
MVGCLLLGIV LTMLLPARLV DR