Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5532 |
Symbol | |
ID | 4096547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 49270 |
End bp | 50106 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638018811 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_625377 |
Protein GI | 107028282 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGACCG ACCAATACGC GGTGATCGGC AATCCGATCG GACACACCAA ATCCCCGCTG ATTCACGGCC TCTTCGCGCA AGAGACGCAG CAGGACCTCC GCTACACGGC GATCGAGGGC CCGCTCGAGC CGGCAGGCGC TTTTGCTGCC ACTGTTCGTG CGTTTTTCGA CGGCGGCGGC AAGGGCATCA ACGTCACCGC GCCGTTCAAG CTCGACGCAT TCGCGATGTC GGACGAACGC AGCGAGCGGG CGCAGCTCGC GGGCGCGGCC AACGCGCTCA AGTTCGACGG CGGCCGCATC CTGGCGGACA ACTTCGACGG CATCGGGCTG GTTCGCGATA TCGAGGCGAA CCTCAATCTG CCGATGGCCG GCAAGCGCGT GCTGGTGCTC GGTGCGGGCG GCGCAGCGCG CGGCGCGCTG CTGCCGTTTC TCGACGCCGG CCCGGCGGAA CTCGTGATCG CGAATCGCGA CGTCGACAAG GCGCGCTTGC TGGCCGCGCA GGTCGCCGGT CGCGGCCCTC TGGTTGCCGG CAGCTATGCC GACCTCGCGC GGATGGGACG TTTCGATCTG GTCGTCAACG CGACGTCGGC CAGTTTGACC GGCGATCTGC CGCCTGTCCC GCCGAGCGTG TTCAGTCCGA CGGGAACCGC CTACGAACTC GCCTATGGCA AGCGGCTCAC GCCGTTTCTC CGGCTCGCTA AAAACGCGGG CGTGCACGGG ATCGCGGATG GTGTCGGCAT GCTGGTCGAG CAAGCGGCCG AGGCGTTCGC ATGGTGGCGC GGCGTGCGGC CCGCGACCAG CGCGGTGATC GACCGGCTGG CCGTGCCGTT CGACTGA
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Protein sequence | MMTDQYAVIG NPIGHTKSPL IHGLFAQETQ QDLRYTAIEG PLEPAGAFAA TVRAFFDGGG KGINVTAPFK LDAFAMSDER SERAQLAGAA NALKFDGGRI LADNFDGIGL VRDIEANLNL PMAGKRVLVL GAGGAARGAL LPFLDAGPAE LVIANRDVDK ARLLAAQVAG RGPLVAGSYA DLARMGRFDL VVNATSASLT GDLPPVPPSV FSPTGTAYEL AYGKRLTPFL RLAKNAGVHG IADGVGMLVE QAAEAFAWWR GVRPATSAVI DRLAVPFD
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