Gene Bcen_5494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5494 
Symbol 
ID4097040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp14418 
End bp14861 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content65% 
IMG OID638018773 
ProductTadE-like 
Protein accessionYP_625339 
Protein GI107028244 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0094498 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCGC GCCATTTTCC ACTGTCACGC CGGCGCGCGC AGCGCGGCGT GGCGATCGTC 
GAATTCGCGC TGATCGCGTC GGTGCTGATC ATGCTGCTGA TCGGCATCTT CGAGTTCGGC
CGCGTGCTGT TCTACTGGAA CACCGCGAGC GAGGCCGTGC GCCTCGGCGC GCGCACCGCG
GTGGTTTGCG ACGTGAACGC CGCGGGTGTC GTGAAACGCG TGCGATCGCT GCTGCCGCTG
CTGTCGAGCG CGAACGTGTC GGTCAACTAC ACGCCGTCGA GCTGCGACGT GAACACGTGC
TCGTTCGTGA CGGTGAGCGT CACGAACGTC ACCGTCAAGA CCATGATCCC GTTCATGAAC
GTCACGGTCA GGATGCCGCC GTTCACGACG ACGCTGCCGC GCGAAAGCCT GAATTCCGCG
ACGGGCGGTT CCGCCTGCAA CTAA
 
Protein sequence
MNARHFPLSR RRAQRGVAIV EFALIASVLI MLLIGIFEFG RVLFYWNTAS EAVRLGARTA 
VVCDVNAAGV VKRVRSLLPL LSSANVSVNY TPSSCDVNTC SFVTVSVTNV TVKTMIPFMN
VTVRMPPFTT TLPRESLNSA TGGSACN