Gene Bcen_5467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5467 
Symbol 
ID4094368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2771079 
End bp2772458 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content66% 
IMG OID638018747 
Productmajor facilitator transporter 
Protein accessionYP_625313 
Protein GI107027802 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.129011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATTT CGCACGCGCT GCATGCCGGC GATGACGCCC CGCGCGCCGA CGCGCCGTCC 
TCGGCGCAGC TTGCCGGCGA CGATTACGCG GCCAGCGAGC GCACGCTCGC CAAGGCGTTC
CGGCGCATTC TGCCGTTCAT CTTCGTCTGC TACGTGATCA GCTATCTCGA CAGGACCAAC
GTCGGTTTCG CGGCGCTCAC GATGAACAAG GATCTCGGTC TGACGGCCGA GCAGTTCGGT
GTCGGTGCAG GCCTCTTCTT CATCGGCTAT TTCCTGTTCG AGATTCCGAG CAACCTGATC
ATGCAGAAGG TCGGGGCGCG CGTATGGATC GCGAGAATCA TGATCACGTG GGGCCTGTTC
TCGATGGCGA CGGCATTCGT CGTCGGACCG AAGAGCTTTG CGGCCGCGCG TTTTCTGCTC
GGGCTCGCCG AGGCGGGGTT CACGCCCGGC ATCTACCTGT ATTTCACGCA CTGGTTTCCC
GGCAAGTGGC GCGCGAAGGT GGCGGCCGCC TTCCTCGTCG GCATTCCCGT CGCGAACATG
ATCGGCTCGC CGATTTCGGG CGCGCTGCTC GAACTCGGCG GCCTGCATGG GCTGCGCAGC
TGGCAGTGGC TGCTGCTGAT CGAAGGCGTC CCTGCGGTGA TGCTCGGCAT CGCGTGCCTG
TTCGTGCTGG CCGACCGTCC AGAGAAAGCC GCGTGGCTCA GTGACGAAGA GAAGGCGTCG
CTCGCGAAGC GCCTCGCGTT CGAGCAGCGC GACATCGGCG CGAAGCACGG CAGCACACTG
CGCGACGCGA TGACGAACTG GCGTGTGTTC GTGCTCGCGT TCGTCAACTT CTGCGGGATC
GTCGGCTCGC TCGGCGTCGG CTTGTGGATG CCGCAGATCA TCAAGCAGTT CGGCGTCGAA
CACGCGGTGG TCGGCTGGCT GACGGCCATC CCGTATGCGA TCGGCGCCGG TGCGATGCTC
TGGTGGGCGC GTCTCGCCAA TCGCGCTGCC AACCGTATTC CGTATGTTGC CGGTGCGCTC
GCGCTGGCCG CGGCGGCGTT GTGTGCGAGC GCCTTCATTC ATGCGCCGGT TTTCAAGCTG
ATCGCACTGT GCGTCACGGT GAGCGGAATC CTCGCGTTCC AGGCGACTTA CTGGGCCATC
CCGTCGGGAT TCCTCACCGG CCGGGCCGCC GCGGGCGGAC TCGCGCTGAT CGTGTCGGTC
GGCAATCTCG GCGGCTTCGT CGGGCCGTCG ATGATCGGTG CGCTCAAGCA ATTCTCGGGC
GGCTTCACCG CGCCGCTCAT CGCCGTGTCG GGTGTGCTGC TACTCGGCGC GTTGACCATC
GCATGGCTCG GCGATCCGGG CTCGGGCGCC GGCGAAGCGC CTGTCACCCG CGAGGCGTGA
 
Protein sequence
MTISHALHAG DDAPRADAPS SAQLAGDDYA ASERTLAKAF RRILPFIFVC YVISYLDRTN 
VGFAALTMNK DLGLTAEQFG VGAGLFFIGY FLFEIPSNLI MQKVGARVWI ARIMITWGLF
SMATAFVVGP KSFAAARFLL GLAEAGFTPG IYLYFTHWFP GKWRAKVAAA FLVGIPVANM
IGSPISGALL ELGGLHGLRS WQWLLLIEGV PAVMLGIACL FVLADRPEKA AWLSDEEKAS
LAKRLAFEQR DIGAKHGSTL RDAMTNWRVF VLAFVNFCGI VGSLGVGLWM PQIIKQFGVE
HAVVGWLTAI PYAIGAGAML WWARLANRAA NRIPYVAGAL ALAAAALCAS AFIHAPVFKL
IALCVTVSGI LAFQATYWAI PSGFLTGRAA AGGLALIVSV GNLGGFVGPS MIGALKQFSG
GFTAPLIAVS GVLLLGALTI AWLGDPGSGA GEAPVTREA