Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5454 |
Symbol | |
ID | 4094355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 2758084 |
End bp | 2759028 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638018734 |
Product | LysR family transcriptional regulator |
Protein accession | YP_625300 |
Protein GI | 107027789 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.900214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATCA CCCTCGACGA ACTCCAGGCC TTTGCCGCCG TGGTCGACAC CGGTTCGATC ACCGCCGCCG CCCAGCAGCT CGACCTCACC GTGTCGGCGA CGAGCCGTAC GCTCGCGCGG CTCGAGGAGA AGCTGAAGAC CACGCTGCTG CGCCGGACCA CCCGTCGGCT CGAACTGACG GAAGAAGGGC GCGCATTCCT GCAGAACGCG CGCGCGATCA TCGAATCGGT CGAGACCGCG GAAGAGCAGA TGCTCGCGCG GCGCGAGATG CCGTCCGGGC GCCTGCGCGT CGACGCCGCG ACGCCGTTCA TGCTGCACGT GATCGTGCCG CTCGTGCGCG GCTACCGCGA ACGCTTCCCG AAGGTCGAGC TGGAGCTGAA CAGCAACGAG GGCATCATCG ATCTGCTGGA GCGGCGCACC GACGTCGCGA TCCGGATCGG CCGGTTGAAG GATTCGACGC TGCACAGCCG GCGCATCGGC AACAGCCGGG TGCGCATCCT GGCAAGCCCC GACTACATCG AAGCGCATGG CCAGCCGCGC AAGGTCGAGG ATCTCGACAA GCACACGCTG CTCGGCTTCA CGCAGCCCGA ATCGCTGAAC GTATGGCCGA TCCTCGGCAC GGACGGCGAA GCATACCGCA TCGAGCCGGA CGTGTATTCG TCGAGCGGCG AAACGCTGCG GCAGCTTGCG CTGGAGGGCA CGGGCGTCGT CTGCCTGTCG GATTTCGTGA CCGCGCAGGA TCGCGAAGCG GGGCGGCTGG TGCAGGTGCT CGCGCGCCAC ACGCTCGACG TCCAGCAGCC GATTCACGCG GTGTACTACC GCAATACCGC GATCTCGTCG CGGATCGCGT CGTTCGTCGA CTACCTGATC GAGGTGCTGG GCGGCGGCGG CAGCGGCGGC GATGCGCCGG CGCGGCGCAA GGCCGCGTGG ATGGAGCCGC AGTAG
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Protein sequence | MKITLDELQA FAAVVDTGSI TAAAQQLDLT VSATSRTLAR LEEKLKTTLL RRTTRRLELT EEGRAFLQNA RAIIESVETA EEQMLARREM PSGRLRVDAA TPFMLHVIVP LVRGYRERFP KVELELNSNE GIIDLLERRT DVAIRIGRLK DSTLHSRRIG NSRVRILASP DYIEAHGQPR KVEDLDKHTL LGFTQPESLN VWPILGTDGE AYRIEPDVYS SSGETLRQLA LEGTGVVCLS DFVTAQDREA GRLVQVLARH TLDVQQPIHA VYYRNTAISS RIASFVDYLI EVLGGGGSGG DAPARRKAAW MEPQ
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