Gene Bcen_5445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5445 
Symbol 
ID4094464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand- 
Start bp2750183 
End bp2750860 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content67% 
IMG OID638018725 
ProductTetR family transcriptional regulator 
Protein accessionYP_625291 
Protein GI107027780 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAACT ATTCAGGTTT TACTATTCGC ATTGGCAAAT CGCTCATGAC CGACCGCCGA 
AACGCCCCGA TCGCCACGCG CAAGCAGCCT CGGCAGGCGC GCTCGACCCG CCTCGTCGAG 
GACGTCCTGC AGGCGGCTAT TCAGGTTTTG GCGAGTGAAG GCGCGCAGCG CTTCACGATG 
GCGCGCGTGG CCGAGCGGGC CGGCGTGAGC GTCGGCTCGC TGTACCAGTA CTTCCCGAAC 
AAGGCGTCCG TACTGTTCCG GCTCCAGCAC GACGAGTGGC GGCAGACGCA CGACATGCTG 
TGCGGGATAC TGCAAGACAC GCGGAAGACG CCGCCCGAGC GGCTGCGCAC CGCCGTCCAC 
GCGTTCATCC GTTCGGAATG CGACGAGGCG CCGATGCGGA TCGCCCTCGA CGATGCCGCC 
CCGCTCTATC GCGACGCCCC CGAGGCGCAG GACGTGAAGG CCGAGGGCAA CCGGGCGTTC 
AGCGCGTTCA TGCGCGAAGC GCTGCCCGAC GTGTCCGACG CCACGCATGC GCTCGCGTGC 
GAGCTGATCC TGACGACGCT CACCACGGGC GGCAAGGCGT TCTCCGAAAC GGCGCGCACG 
CCGGCGGAAA TCGACGCCTA TTCGGCCGCG ATGGCCGACA TGTTCTGCGC GTATCTCGCG 
CATCTCGCGC ACGATTGA
 
Protein sequence
MTNYSGFTIR IGKSLMTDRR NAPIATRKQP RQARSTRLVE DVLQAAIQVL ASEGAQRFTM 
ARVAERAGVS VGSLYQYFPN KASVLFRLQH DEWRQTHDML CGILQDTRKT PPERLRTAVH 
AFIRSECDEA PMRIALDDAA PLYRDAPEAQ DVKAEGNRAF SAFMREALPD VSDATHALAC 
ELILTTLTTG GKAFSETART PAEIDAYSAA MADMFCAYLA HLAHD