Gene Bcen_5442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5442 
Symbol 
ID4094461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2747058 
End bp2747459 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content71% 
IMG OID638018722 
Productmembrane protein-like 
Protein accessionYP_625288 
Protein GI107027777 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTACC TGATGCTGAA GGCCGTGCAT CTGGCCGCCG TCGTCACGTT CGTCGGCGGG 
CTGTTGTTGT CGTCCGTCGC GGTGCGTATT GCGAATCTCG CCGTGCATCG CGCGGTGCGG
CGCTGGGATC GCGCGGTGAC GGCGCCTGCG CTCGCGATCG TCTGGATCGC CGGCATCGCG
CTCGCGCTGA GCGGCCACTG GTTCGGCGCC GCGTGGCTGT CGGTGAAGCT TGCGCTCGTC
GTCGCGCTGT CGGTGCTGCA CGGGGTCCTG GCCGGCACGC TGCGGCGCAT GGAGCGCGAC
GACCTCGTCG TCGTGCCGGC GCCGTGGCTC GGGCACGCGG CCGGCGTGGT GATCGTCGTG
ATGGCGCTCG TCGTCGGGCT GGCCGTGATC AAGCCGTTCT GA
 
Protein sequence
MIYLMLKAVH LAAVVTFVGG LLLSSVAVRI ANLAVHRAVR RWDRAVTAPA LAIVWIAGIA 
LALSGHWFGA AWLSVKLALV VALSVLHGVL AGTLRRMERD DLVVVPAPWL GHAAGVVIVV
MALVVGLAVI KPF