Gene Bcen_5420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5420 
Symbol 
ID4094608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2724022 
End bp2724858 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content63% 
IMG OID638018700 
Producthypothetical protein 
Protein accessionYP_625266 
Protein GI107027755 
COG category[R] General function prediction only 
COG ID[COG3257] Uncharacterized protein, possibly involved in glyoxylate utilization 
TIGRFAM ID[TIGR03214] putative allantoin catabolism protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.120325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAGA CAACGTATTA CGCGCCGCAT GGCGGCCACC CGCCGCAGAC GGATCTGCTG 
ACCGATCGCG CGATGTTCAC CGAGGCGTAC GCGGTGATCC CTAAGGGTGT GATGCGCGAC
ATCGTCACGA GCTGGCTGCC GTTCTGGACC CACACGCGCC TGTGGGTGAT CGCCCGCCCG
CTGTCGGGTT TCGCGGAAAC CTTCTCGCAG TACATCGTCG AAGTGAATCC GGGCGGCGGC
AGCGACAAGC CCGAGCAGGA CAAGAACGCC GAAGCCGTGC TGTTCGTCGT CGAAGGCGAA
GCCGAGCTGA CGCTGCAAGG CCAGAAGCAC ACGCTGAAGC CGGGCGGTTA CGCGTTCATT
CCGCCGGGCG CGGACTGGAC GCTGCACAAC GTCAGCGATG CCGCGGTGCG TTTCCACTGG
GTGCGCAAGC ACTACCAGGC CGTCGACGGC ATTCCGCTGC CGGACGCGTT CGTGACCAAC
GAGCAGGACG TCGAGCCGAT CCCGATGCCG GGCACCAACG GCGCATGGGT GACGACGCGC
TTCGTCGACA TGAGCGACAT GCGTCACGAC ATGCACGTGA ACATTGTGAC GTTCGAGCCG
GGCGGCGTGA TTCCGTTCGC CGAAACGCAC GTGATGGAGC ACGGCCTGTA TGTGCTGGAA
GGCAAGGCTG TCTATCGCTT GAACCAGGAC TGGGTCGAGG TGGAAGCCGG CGACTTCATG
TGGCTGCGCG CGTTCTGTCC GCAGGCATGT TATTCGGGTG GGCCTGGGCG GTTCCGTTAT
CTGCTGTACA AGGATGTGAA CCGTCACATG AACCTGACGT TGAATCCGGC GCGCTGA
 
Protein sequence
MSKTTYYAPH GGHPPQTDLL TDRAMFTEAY AVIPKGVMRD IVTSWLPFWT HTRLWVIARP 
LSGFAETFSQ YIVEVNPGGG SDKPEQDKNA EAVLFVVEGE AELTLQGQKH TLKPGGYAFI
PPGADWTLHN VSDAAVRFHW VRKHYQAVDG IPLPDAFVTN EQDVEPIPMP GTNGAWVTTR
FVDMSDMRHD MHVNIVTFEP GGVIPFAETH VMEHGLYVLE GKAVYRLNQD WVEVEAGDFM
WLRAFCPQAC YSGGPGRFRY LLYKDVNRHM NLTLNPAR