Gene Bcen_5414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5414 
Symbol 
ID4094602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2719000 
End bp2720421 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content72% 
IMG OID638018694 
Productbeta-lactamase 
Protein accessionYP_625260 
Protein GI107027749 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATTC CCCTCAAGAA GCTGATGCTG CGCGGTGTCG CGCTCGCGCT CGTAGCCGCG 
ATCGGCTACA CGGGATATAT GCTGTCCCGG CTCGCGCCGA TCGCGACCGG CTATGCGGCC
AAGGCGCTGT GTTCGGGCGT GTTCGTGTCG GGCCGCCCGG CCGCGTCGGT GATCGACGTC
GACATCATGG CCGGCGTCCA TCCGTTGCTG AAACTGGTGC GACCGTCGCT CGATCCCGAC
CATCATCGTG CGGTGGCGAC CTTCGCCGGC TTCGCCGAAC GCGAAGCCGA CTTCCGGCCC
GGGCTCGGCT GCACGCTCGC TCTTGGGGCC CCGACCGGCG CGGCGGCGGC CACCTTGCCC
GCCGCGTTGC CGCCCCTCCC CGATCCACCG CCCGCGCAGG TCGAGCCGCC CGCACCGGCC
TCGCCGCCCG CCGGCGTCGA CGCGCACCAG TTGCAGGCCG CGCTCGACCG CGCATTCGAC
GAACCCGATC CGGCGCGGCC GCGGCGCACG CGCGCGGTCG TCGTGATGTG GCGCGGCCAC
GTGATCGCCG AACGCTATGC GCCCGGCTTC ACGGCCGATA CGCCGCTGCC CGGCTGGTCG
ATGACGAAGA CCGTCACGGC CGCGCTGGTC GGCGCGCTGG TCGCGCAACA CAAGCTGTCG
CCGGACGCGT CGGCGCTGCT GCCCGAATGG CGCGGCAGCG GCGATCCGCG CGCGGCCATC
ACGCTCGACG AGCTGCTGCG GATGACGAGC GGCCTGCAGT TCAACGAGGA CTACGACGAC
CCGCTGTCCG ACGTCGCGGT GATGCTGTTC ACGCAGCCCG ATACCGCGCG GTTCGCGTCG
GCGAAGCCGC TGGCCGCGAC GCCCGGCGCG CGGTGGTCCT ACTCGAGCGG CACGAGTGCG
ATCGTGGCAC GCGTGATGCG CGAAGCGCTG GGCGGCAGCG ACGCGGACTA TCTTGCGTTT
CCGCGCCGCG CGTTGTTCGC GCCGCTCGGG ATGCGCAGCG CGGTGTTCGA ACCCGACGCG
TCCGGCACGC TCGTCAGCGC GTCGTACATG TATGCGAGCG CACGCGACTG GGCGCGCTTC
GGGCAGCTTC TGCTGCAGGA CGGCGTGTGG AACGGGCAGC GGCTGCTGCC GGAAGGCTGG
GTGCGCTACC TGACGCGCGC GACGCCGCAG TCGTCGCGGC AGGAATTCGG CGCGCAGCTG
TGGGTCAAGG TGCCGGAGCC GTTCAACGAA CGCGATCCGC ACGCGCGGGC GATGCCGGCC
GACGCGTTTC ATGCGGTCGG CCATGAAGGC CAGTTCGTGA GCGTGGTGCC GAGCCGCGAG
CTGGTGGTCG TGCGGCTCGG GCTGTCGCGG CCGGAAGCCG CGTGGAATCA CGAGGCGTTT
CTCGCCCGCG TGCTCGATGC GGTGCCGGCG CCCGGTGCGT GA
 
Protein sequence
MTIPLKKLML RGVALALVAA IGYTGYMLSR LAPIATGYAA KALCSGVFVS GRPAASVIDV 
DIMAGVHPLL KLVRPSLDPD HHRAVATFAG FAEREADFRP GLGCTLALGA PTGAAAATLP
AALPPLPDPP PAQVEPPAPA SPPAGVDAHQ LQAALDRAFD EPDPARPRRT RAVVVMWRGH
VIAERYAPGF TADTPLPGWS MTKTVTAALV GALVAQHKLS PDASALLPEW RGSGDPRAAI
TLDELLRMTS GLQFNEDYDD PLSDVAVMLF TQPDTARFAS AKPLAATPGA RWSYSSGTSA
IVARVMREAL GGSDADYLAF PRRALFAPLG MRSAVFEPDA SGTLVSASYM YASARDWARF
GQLLLQDGVW NGQRLLPEGW VRYLTRATPQ SSRQEFGAQL WVKVPEPFNE RDPHARAMPA
DAFHAVGHEG QFVSVVPSRE LVVVRLGLSR PEAAWNHEAF LARVLDAVPA PGA