Gene Bcen_5412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5412 
Symbol 
ID4094600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2716725 
End bp2718224 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content71% 
IMG OID638018692 
Producthypothetical protein 
Protein accessionYP_625258 
Protein GI107027747 
COG category[R] General function prediction only 
COG ID[COG1090] Predicted nucleoside-diphosphate sugar epimerase 
TIGRFAM ID[TIGR01777] conserved hypothetical protein TIGR01777 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACGT TGCCTGCTTT CGACTGGGCG CTCAACCTGC TGATCGTGCA GGGCGCGATG 
GGCGCATTCG ATACGCTCTA CCATCACGAA CTCACGCAGG ACCTGCCGCA CAGCCCGCGC
GCGCGGCTCG AACTGACGAT TCACGCGGTA CGGTCCGTGC TCTACGGCCT CGTGTTCGCG
TCGATCGCGA ACGTCGCATT TCATGGCGCG TGGGTCGCGG CCCTCGCGGC GGTCGTGTTC
GTCGAGGTGG TGCTGACGTT GTGGGATTTC CTCGTCGAGG ACCAGAGCCG CAAGCTGCCG
GCGACCGAGC GCGTGCTGCA CACGCTGCTG GCCGTCAACG GCGGCGCGCT GTTCGGGATG
ATCGCGATGC AACTCGCCGC GTGGGCGGCC GAGCCGACGG CGCTGCACGC GATCGACGTC
GGCTGGCGCG GCTGGCTGCT CAACCTGTTT GCCGTCGGCG TGACGGTATC GGGCGTGCGC
GACGGGATCG CCGCGTGCCG CCTCGCGCGC CGCGCGCCGG ACGCCAACCC GTTCGCGGGG
CAGCGGCCCG GCCACATGCT CGTCACCGGC GGCACCGGCT TCATCGGCGA AACGCTCGTC
AACCAGCTGC TCGACGCAGG GCAGACGGTC ACGTTGCTGG CGCGCGATCC GCTGCGCGCC
GCCTACCTCT TTCAAGGCCG CGTGCGCAGC GTGACGTCCA TCGACCAGTT GCAGCCGCAC
GAGCGCTTCG ACACGGTCGT CAATCTCGCC GGCGCGCCGG TGCTGGGCGC GCGCTGGAGC
AAGCGCCGGC AGGCGCTGCT GCTCGCCAGC CGCGTCGGCG TGACGCAGGC GCTGATGCGC
TGGGTGGAAA CCGCCGAGGT CAAGCCGCGC ACGTGGATCC AGGCGTCCGC GATCGGCTAC
TACGGCGTGC GGCCGGGCGA CGAACGGCTC GACGAAGGCA GCAGCGCAGG CACCGGTTTC
ATGTCGGATC TGTGCCGGCG GTGGGAGGCG GCCGCCGAGC CGCTCGAACG CCACGGCGTG
CGCGCGGTGG TGCTGCGGCT GGGCATCGTG TTCGGCCCCG GCGGGGCGTT GCGCCCGATG
CTGCTGCCGC ATTACTTCGG GCTGGGCGGC CGCTTCGGCG ACGGTGCGCA GGTGATGAGC
TGGATTCACC GCGACGACGT GCTGCGAATC GTGGCGCGCG CGATGTCGAA TCCGGGCATG
CACGGCGTCT ACAACGCGGT CGCACCGGTG CCGCTGACCC AGCGCGCATT CGTGCAGGTC
GTGACGAAGG TGCTGCGCCG CCCCGCATTT CTGCACATGC CGGCCGCGCC GCTGCGCGCC
GCGATGGGCG AGATGGCCGA GCTGCTGCTG GACGGGCAGC GCGTGATGCC GGCACGCCTG
CATCAGGACG GGTTCATGTT CCGCTTCCCG ACCGCCGAGC ACGCGCTGCG TGACCTGACG
AACCGGCCGC ACACCGATTT CGCGCCCGCG GTCTGCCGTT TCCCGCGCGG TCGTGTATAA
 
Protein sequence
MNTLPAFDWA LNLLIVQGAM GAFDTLYHHE LTQDLPHSPR ARLELTIHAV RSVLYGLVFA 
SIANVAFHGA WVAALAAVVF VEVVLTLWDF LVEDQSRKLP ATERVLHTLL AVNGGALFGM
IAMQLAAWAA EPTALHAIDV GWRGWLLNLF AVGVTVSGVR DGIAACRLAR RAPDANPFAG
QRPGHMLVTG GTGFIGETLV NQLLDAGQTV TLLARDPLRA AYLFQGRVRS VTSIDQLQPH
ERFDTVVNLA GAPVLGARWS KRRQALLLAS RVGVTQALMR WVETAEVKPR TWIQASAIGY
YGVRPGDERL DEGSSAGTGF MSDLCRRWEA AAEPLERHGV RAVVLRLGIV FGPGGALRPM
LLPHYFGLGG RFGDGAQVMS WIHRDDVLRI VARAMSNPGM HGVYNAVAPV PLTQRAFVQV
VTKVLRRPAF LHMPAAPLRA AMGEMAELLL DGQRVMPARL HQDGFMFRFP TAEHALRDLT
NRPHTDFAPA VCRFPRGRV