Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5406 |
Symbol | |
ID | 4094828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 2711231 |
End bp | 2711935 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638018686 |
Product | short chain dehydrogenase |
Protein accession | YP_625252 |
Protein GI | 107027741 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATCG AAGGTGCAGT CGTTTTCATC ACGGGCGCGA ACCGCGGGCT TGGCCTCGAG TTCGCGAAGC AGGCGCTCGA ACGGGGCGCG CGGAAGGTCT ACGCGGGCGC GCGCGATCCG GCCAGCGTGA CGCTGCCGGG CGTCGTGCCC GTGAAGCTCG ACGTGACCGA TCCGGCGGCG GTCGCCGCGG CGGCCGATGC GGCGCGCGAC GTCACGCTGC TGATCAACAA TGCCGGCATC GCGCGGCTCG GCAGCCTGAC CGACGAGGGC GCCGTCGACG CATTGCGCGC GCACCTGGAG ACCAACGTGT TCGGGATGCT GGCGATGTCG CGCGCGTTCG CGGGCACCCT CGCGGCCCAC GGTGGCGGCG CGATCCTGAA CATCCTGTCG GTCGCGAGCT GGGTGAACCG GCCGATCCTG TCGGGCTACG GCGTGTCGAA ATCGGCCGCA TGGGCGCTGA CCAACGGGCT GCGCCATTCG CTGCGCGAGC AGCACACGCA GGTCGTCGGG CTGCATGCCG GTTTCATCGA TACCGACCTG ACGGCCGGCC TCGACGTGCC GAAGGCCACG CCGGCCGACG TCGTGCGTCA GGCGTACGAC GCCATCGAAG CGGGGGCGGA GGAAGTGTCG ACCGACGAGT TCACGCGGCA GGTGAAGGCC ACGCTGTCGT CGGGCGTCTA TCTGGAAGAA CCGGCGCCGC GTTGA
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Protein sequence | MKIEGAVVFI TGANRGLGLE FAKQALERGA RKVYAGARDP ASVTLPGVVP VKLDVTDPAA VAAAADAARD VTLLINNAGI ARLGSLTDEG AVDALRAHLE TNVFGMLAMS RAFAGTLAAH GGGAILNILS VASWVNRPIL SGYGVSKSAA WALTNGLRHS LREQHTQVVG LHAGFIDTDL TAGLDVPKAT PADVVRQAYD AIEAGAEEVS TDEFTRQVKA TLSSGVYLEE PAPR
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