Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5397 |
Symbol | |
ID | 4094819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 2703688 |
End bp | 2704980 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638018677 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_625243 |
Protein GI | 107027732 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.459819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGATC GACAACAGGC TGCCGCGCTG CCGTACGCGG GCGTGCGCGT GATCGAGATG ACGCACATGG TGATGGGCCC GACGTGCGGG ATGCTGCTCG CGGATCTCGG CGCGGAAGTG ATCAAGATCG AACCGATCGC GGGCGACAGC ACGCGCGCGC TGCGCGGTTC CGGCGCGGGC TTCTTCGGGA TGTTCAACCG CAACAAGAAG AGCGTCGCGG TCGACGTGAA GGACCCGCGC GGGCTCGAGA TCGTGCGGCG GCTCGTTGCG ACGGCGGACG TCTTCAGCGA GAACTTCAAG AGCGGCACGA TGGACCGGCT CGGGCTCGGT TACCCGCAAC TGGACGCGCT GAATCCGCGC CTCGTCTACG TGTCGCACAA GGGCTTCCTG CCGGGGCCGT ACGAGCATCG CACCGCGCTC GACGAGGTCG TGCAGATGAT GGGCGGCCTG GCCTACATGA CGGGCCCCGA AGGGCGGCCG CTGCGTGCGG GCGCGAGCGT GAACGACATC ATGGGCGGCA TGTTCGGCGC GATCGGCGCG ATGGCCGCGC TCGCGCAGCG CGAGCGTACG GGCCGCGGCC AGCAGGTGCA GAGTTCGCTG TTCGAGAACA ACGTGTTCCT CGTCGCGCAG CACATGATGC AGTTCGCGGT GACGGGGCAG GCCGCGTCGC CGATGCCGAG CCGGATTTCG GCGTGGGCCG TCTACGACGT GTTCTCCGTC AAGGACGACG AACAGATTTT TCTCGCGGTC GTGTCGGACA CGCAGTGGGT GTTGTTCTGC GACGCGTTCG GCCTGGCCGC GCTGAAGGAC GATCCGCGGC TCGCGACCAA CAACCTGCGC GTGCAGGCGC GCGAATGGCT GCTGCCCGAG CTGCGTTCGC GGCTGGCGCC GTACCCGGCC GCGGAGATCG GCGCGATCTT CGAATCGACC GGCCTGCCGT ATGCGCCGAT CACGAAGCCG CAGGACCTGT TCGACGATCC GCATCTGCTC GCCACGGGCG GCCTCGAAGC CGTGACGCTG CCGGCCGACG CGAGCAGCGC CGGGCGGCCG GTCGACACGC GCACCGCGCT GCTGCCGCTG ACGCTCGCGG GCGAACGCCT GCGGCTGCGC TCGGCGCCGC CCGCGCTCGG CCAGGACACG TGCGCGCTGC TCGGCGAACT CGGCTACACG CCGGACGACG CGCGTGCGCT GATCGAGGCC GGCGTCGTCG CGGGGCGGTA CGGCGCGGAC GCCGCCGCGC ACGGCGACGC GCCGGGCGGC GCGCCGTCGG CGAACGAAGT GGCGAGCGCG TAG
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Protein sequence | MNDRQQAAAL PYAGVRVIEM THMVMGPTCG MLLADLGAEV IKIEPIAGDS TRALRGSGAG FFGMFNRNKK SVAVDVKDPR GLEIVRRLVA TADVFSENFK SGTMDRLGLG YPQLDALNPR LVYVSHKGFL PGPYEHRTAL DEVVQMMGGL AYMTGPEGRP LRAGASVNDI MGGMFGAIGA MAALAQRERT GRGQQVQSSL FENNVFLVAQ HMMQFAVTGQ AASPMPSRIS AWAVYDVFSV KDDEQIFLAV VSDTQWVLFC DAFGLAALKD DPRLATNNLR VQAREWLLPE LRSRLAPYPA AEIGAIFEST GLPYAPITKP QDLFDDPHLL ATGGLEAVTL PADASSAGRP VDTRTALLPL TLAGERLRLR SAPPALGQDT CALLGELGYT PDDARALIEA GVVAGRYGAD AAAHGDAPGG APSANEVASA
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