Gene Bcen_5389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5389 
Symbol 
ID4094966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2695508 
End bp2696578 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content71% 
IMG OID638018669 
Productbeta-lactamase-like 
Protein accessionYP_625235 
Protein GI107027724 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases
[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTTCC GGCAACTTTT CGATCCGCAA TCGTCGACGT ACACGTATCT GCTCGCCGAC 
CCCGCATCGC GCGAGGCGCT GCTGATCGAT CCCGTGTTCG AGCAGGTGCG TCGCGACGCG
GCGCTGCTCG ACGAACTCGG GCTGCGGCTC GTCGCGACCG TCGATACGCA CGTGCATGCC
GATCACGTGA CGGGCGCGTG GCTGCTGAAG CAGCGCACGG GCAGCGCGAT CGCGATCTCG
GCCGCGAGCG GCGCGCACGG CGCCGACCGC TACCTGAACG ACGGCGACCG CTGTGCATTC
GGCCCGCGCT ACCTGACCGT GCGCGCGACG CCCGGCCACA CGAGCGGCTG CATCAGCCTC
GTGCTCGACG ACGAATCGAT GGCGTTCACC GGCGATTGCC TGCTGATCCG CGGTACCGGC
CGCACCGACT TCCAGCAGGG CGACCCGCGT GCGCTGTATC GCGCGGTGCA CGGCCGGCTC
TTCACGCTGC CGGCCGCGTG CCTGCTGTAT CCCGCGCACG ACTATCGGGG GCTCACGGTG
ACGAGCGTCG GCGAGGAGCG GCGCTTCAAC CCGCGTCTCG GCGGCGATCT CAGCGAAGAC
GATTTCGCGG GCTACATGCG CAACCTCGGC CTCGCGCATC CGCGCCAGAT CGACGTCGCG
GTGCCGGCGA ACCTGCAGTG CGGCGTCGCC GCGAACGCGC CCGATGCGCA GGCGGCAGCC
GACTGGGCGC CGCTCGTCTA TACGTTCGCC GGCTTCTGGG AAATCGATCC GCAATGGCTC
GAGGATCATC TGCCGGCCGT GCAGGTCGTC GACGTGCGCG AGCCGGACGA ATTCGCGGGC
CCGCTCGGCC ATCTGCCCGG CGCGACGCCG ATCCCGCTCG GCGAACTGGC CGCGCGCATC
GGCGAAATCG CGCACGACCG GCCGGTGGTG ACCGTGTGCC GGGCCGGCGG GCGCTCCGCG
CAGGCGACGG TGATCCTGAA GAAGGCCGGC TTCGACGCGG TCGCGAACCT CGGCGGCGGG
ATGCTGCGCT GGCGCGCCGA AGGGCGTGTC GTGATGGACG GCCGATCGTA G
 
Protein sequence
MIFRQLFDPQ SSTYTYLLAD PASREALLID PVFEQVRRDA ALLDELGLRL VATVDTHVHA 
DHVTGAWLLK QRTGSAIAIS AASGAHGADR YLNDGDRCAF GPRYLTVRAT PGHTSGCISL
VLDDESMAFT GDCLLIRGTG RTDFQQGDPR ALYRAVHGRL FTLPAACLLY PAHDYRGLTV
TSVGEERRFN PRLGGDLSED DFAGYMRNLG LAHPRQIDVA VPANLQCGVA ANAPDAQAAA
DWAPLVYTFA GFWEIDPQWL EDHLPAVQVV DVREPDEFAG PLGHLPGATP IPLGELAARI
GEIAHDRPVV TVCRAGGRSA QATVILKKAG FDAVANLGGG MLRWRAEGRV VMDGRS