Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5375 |
Symbol | |
ID | 4094952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 2683854 |
End bp | 2684663 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638018655 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_625221 |
Protein GI | 107027710 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.120325 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGCGT CCTTACCCGA GCGCGGCGTG CTGCGCCGCT TCGGCGCGCT GCCCGCGGTG GCCTTGCTCG CGGTGTGCTT CGTGCTGCCG CTGGCCGCGC TGGTCGATGT GGCATGCGCG GGCGGCGGCC GCGCGTTCGC GGCGGTGTGG CGCGATCCGC TCGTCGCGGA TGCGATCGCG CGCTCGCTGG CGCTGGCGGT GGGCGCCGGC ACGCTGTCGG TCGCCGTCGG CGTGCCGGTC GCATTCGCGC TCGCCGGACA GTCGCCGGCC CGTCGCCACT GGTCGCTCGC GCTGCTCGGC GTGCCGCTGG CGTTTTCCGG GCTGGTGATC GCGTACGGGT TCATCCTCGC ATTCGGCCGC GCGGGCTTCG TGACCACGCT GCTGGCCGCG CTGGGCGCCG ATCCGACCGT GGTCGGCGGC GCGATCTATA CGATGCCGGG GCTCGCGGTC GCCTATGCGT ACTACCTGAT CCCGCGCGTC GCGCTGATGA TCTATCCCAC GCTCGCGAAT CTCGACCGGC GGCCGCTCGA AGCGGCGCTG ACGCTCGGCG CGCGACCGTG GCGCGCATGG CTCGACGTCG CGTGGCGCGA ACTGTGGCCG TCGGTCGCAT CCGCATGGTG CCTCGTGACC GCGATCGCGC TCGGCACGTA CGGCACGGCG CTCGCGCTGG CCGGTACGCA GATCAACATC CTGCCGCTGC TGATGTATTT GAAGCTGTCG GACGGGCAAA CCGATTTCTC GCAGGCGGCC GTGCTGTCGA TCGTGCTGAC GGCCATCTGT ACCTGCGTTT TGGCACTAGC AGGCTGTTGA
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Protein sequence | MQASLPERGV LRRFGALPAV ALLAVCFVLP LAALVDVACA GGGRAFAAVW RDPLVADAIA RSLALAVGAG TLSVAVGVPV AFALAGQSPA RRHWSLALLG VPLAFSGLVI AYGFILAFGR AGFVTTLLAA LGADPTVVGG AIYTMPGLAV AYAYYLIPRV ALMIYPTLAN LDRRPLEAAL TLGARPWRAW LDVAWRELWP SVASAWCLVT AIALGTYGTA LALAGTQINI LPLLMYLKLS DGQTDFSQAA VLSIVLTAIC TCVLALAGC
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