| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5347 |
|---|
| Symbol | |
|---|
| ID | 4095295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | + |
|---|
| Start bp | 2650089 |
|---|
| End bp | 2651279 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638018628 |
|---|
| Product | PrpF, AcnD-accessory |
|---|
| Protein accession | YP_625194 |
|---|
| Protein GI | 107027683 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCATA TTCCTCAAAT CAGGATTCCC GCGACCTATA TCCGTGGCGG CACCAGCAAG
GGCGTGTTCT TCCGGCTGCA GGATCTGCCG GATGCCGCGC AGGCGCCGGG CGCCGCGCGC
GACGCGCTGC TGCTGCGCGT GATCGGCAGC CCCGACCCGT ACGGCAAGCA GATCGACGGG
ATGGGCGGCG CGACGTCGTC CACCAGCAAG ACGGTGATCG TGTCGAAGAG CACGCGGCCG
GGCCACGACG TCGACTACCT GTTCGGTCAG GTCGCGATCG ATAAGGCGTT CGTCGACTGG
ACCGGCAACT GCGGCAACCT GTCGGCGGCG GTTGGCCCGT TCGCGATCAG CGGCGGGTTG
GTCGATCCGG CGCGCGTGCC GCGCGACGGC GTCGCGACCG TGCGGATCTG GCAGGCGAAC
ATCGGCAAGA CGATCATCGC CCATGTGCCG ATCACGAACG GTGCGGTGCA GGAGACGGGC
GACTTCGAAC TGGACGGCGT CACGTTCCCG GCCGCCGAAG TGCAGCTCGA ATTCATGGAC
CCGGCCGCCG AGGAGGAAGG CGCGGGCGGC TCGATGTTCC CGACCGGCAA CCTCGTCGAC
GACCTGGCCG TGCCGGGTAT CGGCACGCTG AAGGCGACGA TGATCAACGC GGGCATCCCG
ACGATCTTCG TCGACGCGGA AGCGATCGGC TACACGGGCA CCGAGCTGCA GGACGCGATC
AACGGCGACC CGAAGGCGCT CGAGAAGTTC GAGACGATCC GCGCGCACGG CGCGCTGCGC
ATGGGCCTGA TCGACACGCT CGACGAAATC GCGACGCGGC AGCATACGCC GAAGATCGCG
TTCGTCGCGA AGCCGGCCGA CTACGTCGCG TCGAGCGGCA AGCGCGTGAA CGCGGGCGAC
GTCGACCTGC TGGTGCGCGC GATGTCGATG GGCAAGCTGC ACCACGCGAT GATGGGCACG
GCGGCGGTCG CGATCGGCAC GGCCGCGGCG ATCCCCGGTA CGCTCGTCAA TCTCGCGGCG
GGCGGCGGCG AACGCAACGC GGTGCGCTTC GGGCATCCGT CGGGCACGCT GCGCGTGGGG
GCGGAAGCGC GGCGGGAGAA CGGCGAATGG ACCGTCACGA AGGCGATCAT GAGCCGCAGC
GCGCGCGTGC TGATGGAAGG GTGGGTGCGG GTGCCGGGGG ATGCGTTCTG A
|
|---|
| Protein sequence | MAHIPQIRIP ATYIRGGTSK GVFFRLQDLP DAAQAPGAAR DALLLRVIGS PDPYGKQIDG
MGGATSSTSK TVIVSKSTRP GHDVDYLFGQ VAIDKAFVDW TGNCGNLSAA VGPFAISGGL
VDPARVPRDG VATVRIWQAN IGKTIIAHVP ITNGAVQETG DFELDGVTFP AAEVQLEFMD
PAAEEEGAGG SMFPTGNLVD DLAVPGIGTL KATMINAGIP TIFVDAEAIG YTGTELQDAI
NGDPKALEKF ETIRAHGALR MGLIDTLDEI ATRQHTPKIA FVAKPADYVA SSGKRVNAGD
VDLLVRAMSM GKLHHAMMGT AAVAIGTAAA IPGTLVNLAA GGGERNAVRF GHPSGTLRVG
AEARRENGEW TVTKAIMSRS ARVLMEGWVR VPGDAF
|
|---|
| |