| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5346 |
|---|
| Symbol | |
|---|
| ID | 4095294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | + |
|---|
| Start bp | 2647468 |
|---|
| End bp | 2650062 |
|---|
| Gene Length | 2595 bp |
|---|
| Protein Length | 864 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638018627 |
|---|
| Product | aconitate hydratase |
|---|
| Protein accession | YP_625193 |
|---|
| Protein GI | 107027682 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1048] Aconitase A |
|---|
| TIGRFAM ID | [TIGR01341] aconitate hydratase 1
[TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.992618 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACCG CCAACCGCAA ACCCCTGCCC GGCACGTCGC TGGACTATTT CGACGCGCGT
GCCGCGGTCG ACGCGATCGC GCCCGGCGCC TACGACACGC TGCCGTACAC GTCGCGCGTG
CTCGCCGAAA ACCTCGTGCG CCGCTGCGAT CCGGCGATCC TCGCCGATTC GCTGAAGCAG
ATCATCGAGC GCAAGCGCGA ACGCGATTTC CCGTGGTTCC CGGCGCGCGT GGTGTGTCAC
GACATCCTCG GCCAGACGGC GCTCGTCGAT CTCGCCGGCC TGCGCGACGC GATCGCCGAC
GGCGGCGGCG ACCCGGCGAA GGTGAACCCG GTCGTGCCCG TGCAGCTGAT CGTCGACCAC
TCGCTCGCCG TCGAGTGCGG CGGCTTCGAC CCGGACGCGT TCGCGAAGAA CCGCGCGATC
GAGGATCGTC GCAACGAGGA TCGCTTCCAC TTCATCGAGT GGACGAAGAA GGCGTTCGAG
AACGTCGACG TGATCCCGCC GGGCAACGGC ATCATGCATC AGATCAATCT CGAGAAGATG
TCGCCGGTGA TCCAGGCGCA GGACGGCGTC GCGTTCCCGG ACACCTGCGT CGGCACCGAC
AGCCACACAC CGCACGTCGA TGCGCTCGGC GTGATCGCGA TCGGCGTCGG CGGGCTCGAA
GCCGAGAACG TGATGCTCGG CCGCGCGTCG TGGATGCGCC TGCCCGACAT CGTCGGCGTC
GAGCTGACCG GCAAGCGTCA GCCCGGCATC ACCGCGACCG ACGTGGTGCT CGCGCTGACC
GAGTTCCTGC GCAAGGAAAA GGTGGTCGGC GCGTACCTGG AGTTCCGCGG CGAAGGCGCG
GCGAGCCTCA CGCTCGGCGA TCGCGCGACG ATCTCGAACA TGGCGCCTGA ATACGGCGCG
ACGGCCGCGA TGTTCTTCAT CGATGGCCAG ACGATCGACT ACCTGCGCCT CACGGGCCGC
AGCGACGAGC AGGTGAAGCT CGTCGAAACC TACGCGAAGG CGGCCGGCCT GTGGGCCGAT
ACGCTCGCGA ACGCGCAGTA CGAGCGCACG CTGACGTTCG ACCTGTCGAG CGTCGTGCGC
AACATGGCCG GCCCGTCGAA CCCGCACAAG CGGCTGCCGA CGTCCGATCT CGCCGCGCGC
GGGATCGCCG GCCAGTGGGA CGAGAAGCCG GGCGAGATGC CCGACGGCGC GGTGATCATC
GCCGCGATCA CGAGCTGTAC GAACACCAGC AACCCGCGCA ACGTGATCGC CGCCGCCTTG
CTCGCACGCA ACGCGAACGC GAAGGGCCTC ACGCGCAAGC CGTGGGTCAA GAGCTCGCTC
GCGCCCGGCT CGAAGGCGGT CGAGCTGTAT CTGGAAGAGG CGAACCTGCT GCCCGAGCTC
GAGAAGCTCG GCTTCGGCAT CGTCGCGTTC GCGTGCACGA CCTGCAATGG GATGTCGGGC
GCGCTCGACC CGAAGATCCA GCAGGAGATC GTCGAGCGCG ACCTGTACGC GACGGCCGTG
CTGTCCGGCA ACCGCAACTT CGACGGCCGC ATTCACCCGT ATGCGAAGCA GGCGTTCCTC
GCGTCGCCGC CGCTCGTCGT CGCGTATGCG ATCGCCGGCA CGATCCGCTT CGACATCGAG
AAGGACGTGC TCGGCCACGA TCAGGATGGC AAGCCCGTCA CGCTGAAGGA CATCTGGCCG
ACCGACGAGG AGATCGACGC GATCGTCGCG TCGAGCGTGA AGCCCGAGCA GTTCCGCAAG
GTCTACGAGC CGATGTTCGC ACGCAGCGCC GACGCGGGCG AACGCGCGGC GCCGCTGTAC
GACTGGCGCG CGCAGAGCAC GTACATCCGC CGTCCGCCGT ACTGGGAAGG CGCGCTGGCC
GGCGAACGTA CGCTCAAGGG CATGCGCCCG CTCGCGGTGC TCGGCGACAA CATCACGACC
GACCACCTGT CGCCGTCGAA CGCGATCCTG CTCGATAGCG CGGCCGGCGA ATATCTCGCG
AAGATGGGCC TGCCGGAAGA AGACTTCAAC TCGTACGCGA CGCACCGGGG CGACCACCTG
ACCGCGCAGC GCGCGACCTT CGCGAACCCG ACGCTCGTCA ACGAGATGGC GGTCGTCGAC
GGCGCGGTGA AGAAGGGCTC GCTCGCGCGC GTCGAGCCGG AAGGCAAGGT CATGCGGATG
TGGGAAGCGA TCGAGACGTA CATGAATCGC AAGCAGCCGC TGATCGTCGT GGCCGGCGCC
GACTACGGCC AGGGCTCGTC GCGCGACTGG GCCGCGAAGG GCGTGCGGCT CGCGGGCGTC
GAGGCGATTG CCGCCGAAGG CTTCGAGCGG ATTCACCGCA CGAACCTGAT CGGGATGGGC
GTGCTGCCGC TCGAGTTCAA GCCGGGCACC AACCGGACGA CGCTCGGCAT CGACGGCACC
GAGACCTTCG ACGTGATCGG CGAGCGCACG CCGCGCGCCG ATCTGACGCT CGTGATTCAC
CGCAAGAACG GCGAGCGCGT CGAGGTGCCG ATGACGTGCC GGCTCGATAC GGCCGAGGAA
GTGTCGATCT ACGAGGCGGG CGGCGTGCTG CAGCGTTTCG CGCAGGACTT CCTCGAATCG
TCGCAGGCGG CTTGA
|
|---|
| Protein sequence | MNTANRKPLP GTSLDYFDAR AAVDAIAPGA YDTLPYTSRV LAENLVRRCD PAILADSLKQ
IIERKRERDF PWFPARVVCH DILGQTALVD LAGLRDAIAD GGGDPAKVNP VVPVQLIVDH
SLAVECGGFD PDAFAKNRAI EDRRNEDRFH FIEWTKKAFE NVDVIPPGNG IMHQINLEKM
SPVIQAQDGV AFPDTCVGTD SHTPHVDALG VIAIGVGGLE AENVMLGRAS WMRLPDIVGV
ELTGKRQPGI TATDVVLALT EFLRKEKVVG AYLEFRGEGA ASLTLGDRAT ISNMAPEYGA
TAAMFFIDGQ TIDYLRLTGR SDEQVKLVET YAKAAGLWAD TLANAQYERT LTFDLSSVVR
NMAGPSNPHK RLPTSDLAAR GIAGQWDEKP GEMPDGAVII AAITSCTNTS NPRNVIAAAL
LARNANAKGL TRKPWVKSSL APGSKAVELY LEEANLLPEL EKLGFGIVAF ACTTCNGMSG
ALDPKIQQEI VERDLYATAV LSGNRNFDGR IHPYAKQAFL ASPPLVVAYA IAGTIRFDIE
KDVLGHDQDG KPVTLKDIWP TDEEIDAIVA SSVKPEQFRK VYEPMFARSA DAGERAAPLY
DWRAQSTYIR RPPYWEGALA GERTLKGMRP LAVLGDNITT DHLSPSNAIL LDSAAGEYLA
KMGLPEEDFN SYATHRGDHL TAQRATFANP TLVNEMAVVD GAVKKGSLAR VEPEGKVMRM
WEAIETYMNR KQPLIVVAGA DYGQGSSRDW AAKGVRLAGV EAIAAEGFER IHRTNLIGMG
VLPLEFKPGT NRTTLGIDGT ETFDVIGERT PRADLTLVIH RKNGERVEVP MTCRLDTAEE
VSIYEAGGVL QRFAQDFLES SQAA
|
|---|
| |