| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5332 |
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| Symbol | |
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| ID | 4095280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008061 |
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| Strand | + |
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| Start bp | 2632132 |
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| End bp | 2633619 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638018613 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_625179 |
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| Protein GI | 107027668 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAACG ACTGGGCGCG CCTGCCCGTC AACTACGGCG ACGTGCTGCG GCGCGCCGCC
GAGTCGCTAT TCCGGACCTT CGAGGATTCG AGTGCGGGCA CGGTGGTCGT CGATCGCGAC
GCGCGCGTCG TGTGGATGAA CGAGCGTTAC GCGGCACGCT TCGGTTTCGC CGATCCGCAG
CAGGCCGTCG GCCTCGACTG CGAGGCCGTG ATCCCGAACA GTCTGATGCG GGAAGTCGTG
TCGACCGGGC AGCCGATCCT GCTCGACATC ATGGAGACGG GCCGCGAGCC GCTCGTCGTC
ACGCGCCTGC CGTTGAAGAA CGAGGCCGGC GAAACGGTCG GCGCGATCGG CTTCGCGCTG
TTCGACCAGT TGAAGACCCT CACGCCGATT TTTTCCCGCT ACGCGCAGCT TCAGCAGCAG
CTGATCGCGA CGCAGCGCTC GCTCGCGCAG GCGCGCCGCG CGAAATACAC GTTCGCGAGC
TTCGTCGGCA CGAGTGCCGC GAGCCTCGAG ACCAAGCGCC AGGCGCGCCG CGCGGCGCAA
GTCGATTCGC CGGTGCTGCT GCTCGGCGAG ACGGGCACCG GCAAGGAACT GCTCGCCCAC
GCGATTCACG CGGCGTCGGC GCGTGCGCTG CAGCCGCTCG TGACCGTCAA CGTCGCCGCG
ATTCCCGACA CGCTGCTCGA AACCGAATTC TTCGGCGCGG CGCCCGGCGC GTACACCGGC
GCCGATCGCA AGGGGCGCGT CGGCAAGTTC GAACTGGCCG ATCGCGGCAC GCTGTTTCTC
GACGAGATCG GCGACATGCC GCTGCCGTTG CAGGGCAAGC TGCTGCGCGT GCTGCAGGAC
AAGGAGTTCG AGCCGGTCGG TTCGAACCGG ATCGTGCGCG CGGACGTGCG CATCATCGCC
GCCACGTCGG CCGACCTGCC GGCGCTGGTG GCGGCTGGGC GTTTTCGCGC GGATCTCTAT
TACCGGCTGA ACGTGCTGAC GATCCATGCG CCGCCGCTGC GCGAACGCGC TTCCGACATC
GCGGCGCTCG TCTACGCGAC GCTCGAGGAG CTGGCCGCGC AGCACGGGCG CGCCGCACAC
TGCGAACTGA CCGACGATGC GTTGCGGATG CTGTGCGCGT ATCCGTGGCC CGGCAACGTG
CGCGAGTTGC GCAATACGCT CGAGCGCGCG CTGATGCTGT CGGATCGCTC GGTGATCGAT
GCGCGCGCGC TCGCGCCGTT TCTCGGGCCG GTGCGCATTT CGCCGGACGG CGCTGCGCCG
GCGCAGCGGG TTGGCGCGGT GCCGGCCGAG CAGCGCGCGG GCGATGCCCC GACGGCATCC
GGTGCGCCGG CCGTCTCGTA TGCCGATGCA CTGGCGGCGT GGGAGCGCCA GTTCCTGACC
GATGCGCTCG CGGCCTGTGA CGGCAAGGTC GTCGACGCGG CTGCGCGTAT CGGCATCGGC
CGCGCGACGC TGTACAAGAA ACTGGCGGCG CTGGGCATCG ACCGGTAG
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| Protein sequence | MMNDWARLPV NYGDVLRRAA ESLFRTFEDS SAGTVVVDRD ARVVWMNERY AARFGFADPQ
QAVGLDCEAV IPNSLMREVV STGQPILLDI METGREPLVV TRLPLKNEAG ETVGAIGFAL
FDQLKTLTPI FSRYAQLQQQ LIATQRSLAQ ARRAKYTFAS FVGTSAASLE TKRQARRAAQ
VDSPVLLLGE TGTGKELLAH AIHAASARAL QPLVTVNVAA IPDTLLETEF FGAAPGAYTG
ADRKGRVGKF ELADRGTLFL DEIGDMPLPL QGKLLRVLQD KEFEPVGSNR IVRADVRIIA
ATSADLPALV AAGRFRADLY YRLNVLTIHA PPLRERASDI AALVYATLEE LAAQHGRAAH
CELTDDALRM LCAYPWPGNV RELRNTLERA LMLSDRSVID ARALAPFLGP VRISPDGAAP
AQRVGAVPAE QRAGDAPTAS GAPAVSYADA LAAWERQFLT DALAACDGKV VDAAARIGIG
RATLYKKLAA LGIDR
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