Gene Bcen_5329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5329 
Symbol 
ID4094406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2628065 
End bp2629765 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content70% 
IMG OID638018610 
Productthioredoxin domain-containing protein 
Protein accessionYP_625176 
Protein GI107027665 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2143] Thioredoxin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGGCG CTGCCTGTCG GCCGGCCTCA TCGTCATCGC TTCACGGCCC CCGTTGCGTG 
CCCGGCATCG CCCTGAAACC GTCTTTTTCA ACGGAACCCG CTTCGATGAA AACCGTTCTC
CGCAATCTCA CCGCCGCCTG CCTGTTCGTG GCCGCCAGCG CGGCGCTCGC CGCCGCCACG
CCCGCGGGCG CCCCGGTGGC GAGCGCATCG CCAGACGGTG CGCATCTGCC GCCCGGCATC
GCGTGGCAAC ACGGCGACGT CGATGCCGCG TTCGCGCTCG CGAAGCGCGA GGGCAAGCCG
CTGCTGCTGT ACTGGGGCGC GGTATGGTGC CCGTCGTGCA ACCAGGTGAA GTCGACGATC
TTCAGTCAGC AGGCATTCAA GACGCGCTCG TCGTTCTTCG TGCCCGTGTA TCTCGACGGC
GATACCGAAA GCGCGCAGAA GCTCGGCGAG CGTTTCAAGG TGCACGGCTA TCCGACGATG
ATCCTGTTCC GTCCCGACGG CACCGAAGTG ACGCGGCTGC CGGGCGAAGC CGATCTCGAC
CGCTACATGC AGGCGCTGTC GCTCGGGATG ACGGCCGCGC ATCCGGTGCG GCAGACGCTC
GCGACGGCGC TGAAGAGCGG CGCGTCACTG ACGCCGGACG AATGGCGCCT GCTGGCCGAC
TATTCATGGG ATACCGACGG CGCGCTGCCG GTGCCGGCCG ATCGTGTCGC GCAGACGCTG
CAGTCGCTCG CGCAACGCGC GCGGGCGGCC GGTGCGAAAG ACGAATCGGC GCGCTTCGCG
CTGAAGTCGG CGGTGGTCGC CGCGTCGGAC GATCCGACGC AGGCCGGCGC GCTCGACAAG
GCCGCGCTCG CCGATTCGCT GCGCACGGTG CTGCACGATG CCGCGCTGTC GCGGGCCGAT
TCGGACGTGC TGGTCGCCGC ACCCGCGCGC GTGGTCGCGT ATCTCGGCGG CGACGACGCG
CAGCGCACGA AATTGCGCGG CGCGTATGAC ACGGCGCTGG CGCGCCTGTC GACCGACACC
ACGCTGTCGT CGATCGACCG GCTGATGGCG CTGCACGGCC GCGTGCTGCT CGCGCGCGGC
GACGCACGCA AGGGCGCACC ACTCGCCGCA CCGGCGCTCG CCGATACCGC GCGCAAGCAG
ATTGCCGCAT CGGTGCAGGG CGCGGCGAAT GCATACGAGC GGCAGGCGCT CGTCAGCGAA
GGCGCGGACA CGCTGACCGA CGCGGGGCTG TACGACGAAT CGGATGCGTT GCTGAAGGCC
GAGCTGCCGC GTTCGTCCAC GCCGTACTAC TTCATGTCGG GGCTGGCCGC GAACGCGAAG
GCGCGCGGCG ACAAGGCGGC CGCGCTCGAC TGGTATCGCA AGGCGTACGA CGCGGCGAGC
GGCCCGGCGA CGAAGCTGCG CTGGGGCGCG ACCTACTTCG CGAATGCGGT TGAACTGGCG
CCGGACGATT CGGCGCGCAT CGAAGGGATT GCCGCCAGTG TGCTCGCGCA GGCCGACAAG
ACCCGGGACG CGTTCTACGG CGCGAACCTG CGCGCGCTGA CCAAGGTCGT CACGCAGCTG
AACCGCTGGC GCGGCAGCGG CGCACACGAT GCGTCGGTCA GGTCGGTCGT CAAGCAGTTC
GACGGCGTGT GCGGGAAACT GCCGGCCGGC GATCCGCAGG CGGCGGCATG CACGAAGCTG
ATCCAGCCCG TGAAGGCGTA A
 
Protein sequence
MRGAACRPAS SSSLHGPRCV PGIALKPSFS TEPASMKTVL RNLTAACLFV AASAALAAAT 
PAGAPVASAS PDGAHLPPGI AWQHGDVDAA FALAKREGKP LLLYWGAVWC PSCNQVKSTI
FSQQAFKTRS SFFVPVYLDG DTESAQKLGE RFKVHGYPTM ILFRPDGTEV TRLPGEADLD
RYMQALSLGM TAAHPVRQTL ATALKSGASL TPDEWRLLAD YSWDTDGALP VPADRVAQTL
QSLAQRARAA GAKDESARFA LKSAVVAASD DPTQAGALDK AALADSLRTV LHDAALSRAD
SDVLVAAPAR VVAYLGGDDA QRTKLRGAYD TALARLSTDT TLSSIDRLMA LHGRVLLARG
DARKGAPLAA PALADTARKQ IAASVQGAAN AYERQALVSE GADTLTDAGL YDESDALLKA
ELPRSSTPYY FMSGLAANAK ARGDKAAALD WYRKAYDAAS GPATKLRWGA TYFANAVELA
PDDSARIEGI AASVLAQADK TRDAFYGANL RALTKVVTQL NRWRGSGAHD ASVRSVVKQF
DGVCGKLPAG DPQAAACTKL IQPVKA