Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5323 |
Symbol | |
ID | 4094400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 2621305 |
End bp | 2622741 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638018604 |
Product | outer membrane porin |
Protein accession | YP_625170 |
Protein GI | 107027659 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCTTG CCTGGGGACT GCCGGCGCTC GCCGGCGTGT CGCTGACGGG CGTCGCGCAC GCCGACGACG CGGCCTCCGC GCCGCTGACG GTCGCGCAGG CCGCGCCGGC CGCCGGGTCG GGCGCATCCG TTGCGCAGGC AACGACCCCG AACGCCATTG TCAACGCCGA GGCGAGCCAG GCCGTCACGC CGCCCGACGA GCCGTCGGCG CAGTCGAAGT CGAACGGCTT CATCGCCGAC AGCCATCTCG ACTTCCTGTT CCGCAACTAT GCGGACGTGC TTGACAACAA GGGCGGCCCG CATCGTCATG CGTGGGTCCA GGGCGCGATG GCGAACTTCG AGTCGGGCTA CACGACCGGC CTGATCGGGA TCGGCTTCGA TGCGTCGTTG TATGCGGCGC TGAAGCTCGA CGGCGGCCAG GGCGCCGGCA GCATGGTGCA CATCGCGAAG GGCGGCGGCG GCGGCAACCA GCTCGCGTGG GCCTACCCGG GCATCTACGA CGTCAAGGCG CGCATCTCGA ACACGGTGGT CAAGTACGGT CTGCAGGCCG TCGACAACCC GTTCATGGAG CAGCACGACA ACCGTGCGCT GCCGCCGACG TTCCTCGGCG CGACGCTCGT CAGCAATGAA TTCAAGAACG TGATGCTCGA GGCCGGCAGC TTCACGAAGA CCGACGCGCG CGGCCATACG ACGCTCACCA ACCTGACGAC GCAATACGGC GGCACGCGCA TCAATCGCCT GACCTACGTC GGCGGCACGT GGGACTACTC GCCGAACGGC GAAGTCGCGC TGTACGCGAA TCAGGCCGAC GACGTGTGGC ACCAGTACTA CGCGTCGGTG AAGCACAGCA TCGGCAGCCC GCAGACGATC AAGTGGACCG GCTTCGGCAA CGTCTACTCG ACGCACGACA CGGGCGATGC GCTGCAAGGC AAGATCAACA ACAACGCGTA CAGCCTGTCG CTGGCCGCGC AGCATGGCCC GCATGAACTG CTGCTCGGCT TCCAGCAGGT GCTCGGCGAC CAGTTCTTCG ACTACCTGAA CGAAACGAAC GGCATCTTCC TGGCCAACTC GATGGACGTC GACTACAACG CGCCGCACGA AAAATCGCTG CAACTGCGTT ACACGTTCTA CGGCAAGGAC GCCGGCCTGC CGGGCTTCAA GGCGATGGTG TGGGGCGTGA CGGGCTGGGG CGCGGACGGC AGCGCGGGCG CGGCGAACGA TCCGAGCAAG TCGAGCATCT ACTGGAGCAA TGGCGCGCCG GTGCAGGGCC GTCACCACGA GTTCGGCTTC ATCCCGTCGT ACACGTTCCA GAGCGGCAAG CTGAAGAACA CGAAGGTCAC GTTCATCGCG ATGTGGCACG CCGGCTCGGC CCACTACTCG GACGCGACGA ACACCGAGTA CCGTCTGGTC GTGAACCTGC CGCTGCACGC GTTCTGA
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Protein sequence | MLLAWGLPAL AGVSLTGVAH ADDAASAPLT VAQAAPAAGS GASVAQATTP NAIVNAEASQ AVTPPDEPSA QSKSNGFIAD SHLDFLFRNY ADVLDNKGGP HRHAWVQGAM ANFESGYTTG LIGIGFDASL YAALKLDGGQ GAGSMVHIAK GGGGGNQLAW AYPGIYDVKA RISNTVVKYG LQAVDNPFME QHDNRALPPT FLGATLVSNE FKNVMLEAGS FTKTDARGHT TLTNLTTQYG GTRINRLTYV GGTWDYSPNG EVALYANQAD DVWHQYYASV KHSIGSPQTI KWTGFGNVYS THDTGDALQG KINNNAYSLS LAAQHGPHEL LLGFQQVLGD QFFDYLNETN GIFLANSMDV DYNAPHEKSL QLRYTFYGKD AGLPGFKAMV WGVTGWGADG SAGAANDPSK SSIYWSNGAP VQGRHHEFGF IPSYTFQSGK LKNTKVTFIA MWHAGSAHYS DATNTEYRLV VNLPLHAF
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