Gene Bcen_5322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5322 
Symbol 
ID4094399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand+ 
Start bp2620081 
End bp2621100 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content70% 
IMG OID638018603 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein-like 
Protein accessionYP_625169 
Protein GI107027658 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTCG ATGAACGCCG CCAAGCCGGC GCGACGGACG ACACGCTGCT GTCCGTCGAG 
AATCTGAAGG TGCATTTCCG CGTGCCGCTG GGCGGCTATC CGTGGTCGCC GAAAGGCACG 
TTGCGCGCGG TCGACGGCGT GTCGTTCGAC GTGAAGCGCG GCGAGACGGT CGGGCTCGTC 
GGCGAATCGG GCTGCGGGAA GTCGACGCTG GCGCGCGCAT TGATCGGCCT CGTGCCGATG 
ACGGCCGGCA CCGTGAAATG GCGCGGCCAG GCCGTGGCGC CGGATCACCT GCGCGGCACC 
GCGATGCGGC GCGAAGTGCA GATGATCTTC CAGGACCCGC TCGCGTCGCT CGATCCGCGC 
ATGACGATCG AGCAGGTCGT CGCGGAGCCG CTCGTCACGC ACCACGCCGG CCTCGGCCGT 
GCCGAAGTGC GCCGCCGCGT GGTCACGATG CTCGAGCGCG TCGGTCTGAA CGCGCATCAC 
CTGCTGAGAT ATCCGCATGA ATTTTCCGGC GGGCAGTGCC AGCGCGTCGG CATCGCGCGT 
GCGCTGATCA GCGAGCCGAA GCTCGTGATC TGCGACGAAC CCGTATCGGC GCTCGACGTG 
TCGATCCAGG CGCAGATCGT GAACCTGCTG CGCGATCTGC AACGCGAACT GTCGTTGTCC 
TATCTGTTCG TCGCGCACGA TCTGGCGGTG GTGAAGGCCA TCAGCCAGCG CGTGCTCGTG 
ATGTATCTCG GCCGCGTGAT GGAGTTCGGC ACGCGGCATG ACGTGTACGG CGTGCCGCAA 
CACCCGTACA CGAAGGCGCT GCTCGATGCG GCGCCGACGC CGGAGCCGGC GCGCGAGCGT 
GCTCGCCGTC CGATGCTGCT GGCGGGCGAG ATGCCCTCGC CGCTCAACCC GCCGTCCGGC 
TGCGCGTTCC GCACGCGCTG CCCGGTCGCG ATCGACGCGT GCGCGCAGGA CGTGCCGCTG 
CCGGAAGTGC GGCAGGGGTC GGCGGCGCGC GTCGCGTGCA TCCGCGCGGG CGCGGCGTGA
 
Protein sequence
MSVDERRQAG ATDDTLLSVE NLKVHFRVPL GGYPWSPKGT LRAVDGVSFD VKRGETVGLV 
GESGCGKSTL ARALIGLVPM TAGTVKWRGQ AVAPDHLRGT AMRREVQMIF QDPLASLDPR 
MTIEQVVAEP LVTHHAGLGR AEVRRRVVTM LERVGLNAHH LLRYPHEFSG GQCQRVGIAR 
ALISEPKLVI CDEPVSALDV SIQAQIVNLL RDLQRELSLS YLFVAHDLAV VKAISQRVLV 
MYLGRVMEFG TRHDVYGVPQ HPYTKALLDA APTPEPARER ARRPMLLAGE MPSPLNPPSG 
CAFRTRCPVA IDACAQDVPL PEVRQGSAAR VACIRAGAA