| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5309 |
|---|
| Symbol | |
|---|
| ID | 4094595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | + |
|---|
| Start bp | 2605722 |
|---|
| End bp | 2606909 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638018590 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_625156 |
|---|
| Protein GI | 107027645 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | [TIGR03469] hopene-associated glycosyltransferase HpnB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.286135 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCTGG CGATCGCTTT CCTCGTGTCC GGCCTGTCGC TGGTGATCTG GATCGTGTTG
CTCGTCGCGC GCGGTGGCTT CTGGCGCGCG CAGCCCGCGC GGCCGCTGCC GCCGGAAGCC
CGCGGCGCGG CGGCCGAGGC CGGCTGGCCG GCCGTCGTGG CGGTCGTGCC GGCGCGCAAC
GAAGCCGACG TGATCGCCCG TGCGGCGACT TCGCTGCTCG AGCAGGACTA TCCGGGCGAC
TTCCATCTGA TCATCGTCGA CGACCACAGC GACGACGGTA CCGCCGACGC GGCCCGCGCG
GCCGCGCTCG CGATCAACCG TGCCGACCGG CTGACGGTGC TGAGCGCGAA GCCGTTGCCG
GCCGGCTGGT CCGGCAAGGT GTGGGCGCAG TCGCAGGGGA TCGCGGCGGT GCGGACGCTC
GGCCTGCCGG CCGATTACCT GCTGCTGACG GATGCCGACA TCGGCCATCC GCCCGACGCC
GTCGCGCAGC TCGTCACGCG TGCACAGGCC GAGCATCGCG ATCTCGTATC GCTGATGGTG
CGGCTGCGCT GCGACTCGTT CTGGGAAAAG GCGCTGATTC CGGCGTTCGT GTTCTTCTTC
GCGAAGCTGT ATCCGTTCTC GTGGATCAAC AACCCGCGCA ACCGGACGGC CGGCGCCGCG
GGCGGCTGCA TGCTCGTGAA GCGCACGGCG CTGGAAGAAG CGGGCGGCAT CGAATCGATT
CGCGGCGCGC TGATCGACGA CTGCAGCCTC GCCGCGCAGA TCAAGCATCG CGGCAGCGGC
CGCCATCCGA TCCGGCTCGA TCTCGCCGAT CGCAGCGTGT CGCTGCGCCC GTACGACAGC
TGGCGCGACA TCTGGAACAT GATCGCGCGC ACCGCGTTCA CGCAACTGCA CTATTCGCCG
CTGCTGCTGG CCGGCACGCT GCTCGGGATG ACGATCATCT ATCTGGTGCC GCCCGTCGCT
GCGCTCGCCT ACGGCGCGCG TGCGTGGCCG GCCTGGCTCG CATGGGCGTC GATGTGCGCC
GCGTATGCGC CGATGCTGCG CTACTACCGG CGCTCGCCGC TGTGGGCGCC CGCGCTGCCG
CTCGTCGCGC TGTTCTATGT GGGCGCGACG TTCGCGTCCG CGTGGCGTTA CTGGCGCGGC
AAGGGCGGGC AGTGGAAGGC GCGCGTGCAG GCGCCGGTGG ATCGCTGA
|
|---|
| Protein sequence | MMLAIAFLVS GLSLVIWIVL LVARGGFWRA QPARPLPPEA RGAAAEAGWP AVVAVVPARN
EADVIARAAT SLLEQDYPGD FHLIIVDDHS DDGTADAARA AALAINRADR LTVLSAKPLP
AGWSGKVWAQ SQGIAAVRTL GLPADYLLLT DADIGHPPDA VAQLVTRAQA EHRDLVSLMV
RLRCDSFWEK ALIPAFVFFF AKLYPFSWIN NPRNRTAGAA GGCMLVKRTA LEEAGGIESI
RGALIDDCSL AAQIKHRGSG RHPIRLDLAD RSVSLRPYDS WRDIWNMIAR TAFTQLHYSP
LLLAGTLLGM TIIYLVPPVA ALAYGARAWP AWLAWASMCA AYAPMLRYYR RSPLWAPALP
LVALFYVGAT FASAWRYWRG KGGQWKARVQ APVDR
|
|---|
| |