Gene Bcen_5308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5308 
SymbolispH 
ID4094594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand- 
Start bp2604378 
End bp2605319 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content66% 
IMG OID638018589 
Product4-hydroxy-3-methylbut-2-enyl diphosphate reductase 
Protein accessionYP_625155 
Protein GI107027644 
COG category[I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0761] Penicillin tolerance protein 
TIGRFAM ID[TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.276344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGTCA TCCTTGCCCA GCCCCGCGGC TTTTGTGCGG GGGTTGTCCG TGCGATCGAG 
ATCGTCGATC GCGCGCTGCA ACAGCACGGT GCGCCGGTCT ATGTGCGTCA CGAGATCGTG 
CATAACCGGC ATGTCGTCGA AAATCTGCGT AATAAAGGGG CACGATTCGT TGAGGAACTC 
GACGAGGTGC CGCACGGCGC TGTCGCGATC TTCAGCGCGC ACGGTGTCGC CCAGACGGTC 
GAGCGCGACG CGCAGACGCG CGGGCTCGAC GTGCTCGACG CGACCTGCCC GCTCGTCACG 
AAAGTGCACG TGCAGGGGCG CCAGTACGTC GCGGCGGGCC GCCGGCTGAT CCTGATCGGC 
CACGCGGGCC ACCCGGAAGT CGAGGGCACG ATCGGCCAGA TTCCGGCCGA GGTGATCCTC 
GTGCAGAGCG AAGCAGAAGT CGATACGCTG ACGTTGCCCG TCGATACGCC GGTCGCGTAC 
ATCACGCAGA CCACGCTGTC GGTCGACGAC ACGCGCGGCA TCATCGAAGC GCTGCAGCGC 
CGGTTCACCG ACATCGTCGG CCCGGATACG CGCGACATCT GCTATGCCAC GCAGAATCGC 
CAGGCCGCCG TGCGCGAGCT GAGCGAACAG GTTGACGTGC TGCTCGTCGT CGGTGCGACG 
AACAGCTCGA ACTCGAACCG CCTGCGCGAG ATCGGCACCG AAAGCGGTGT GCCGAGCTAT 
CTCGTCGCCG ACGGCTCGGA AGTGAAGGCC GAATGGTTCG CGGGCGTGCA GACGGTCGGC 
CTGACCGCCG GCGCGTCGGC GCCCGAAGAA ATGGTCGAGG ATGTAATCGG CGCGCTGCGC 
GCGCTGGGGC CCGTCGATGT CGCGACGATG GCGGGCCGTG AAGAAAAAGT CGAATTCAAG 
TTGCCGGCGA AGCTCACGCA AGCTGTCGCC CGCGAAGTTT AA
 
Protein sequence
MRVILAQPRG FCAGVVRAIE IVDRALQQHG APVYVRHEIV HNRHVVENLR NKGARFVEEL 
DEVPHGAVAI FSAHGVAQTV ERDAQTRGLD VLDATCPLVT KVHVQGRQYV AAGRRLILIG 
HAGHPEVEGT IGQIPAEVIL VQSEAEVDTL TLPVDTPVAY ITQTTLSVDD TRGIIEALQR 
RFTDIVGPDT RDICYATQNR QAAVRELSEQ VDVLLVVGAT NSSNSNRLRE IGTESGVPSY 
LVADGSEVKA EWFAGVQTVG LTAGASAPEE MVEDVIGALR ALGPVDVATM AGREEKVEFK 
LPAKLTQAVA REV