| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5300 |
|---|
| Symbol | |
|---|
| ID | 4094586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | + |
|---|
| Start bp | 2598053 |
|---|
| End bp | 2598673 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638018581 |
|---|
| Product | hemolysin III family channel protein |
|---|
| Protein accession | YP_625147 |
|---|
| Protein GI | 107027636 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
|---|
| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.503604 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCATGTCG GTGAGCGTTT CAACAGCATT TCCCATCTCG TCGGCGCGGT GCTGTCGGTG
GCGGGTCTCG TCGCGCTCGT GACGATGGGC GCGCTCGAAG GCGACCCGTA CAAGGTGGTG
AGCTTCAGCG TGTACGGCGC GATGCTGATC CTGCTCTACG CGATCTCGAC GGCATATCAC
AGCGTGCGCA ACCCGCGCCT GAAGGCGATC CTGCAGAAAT GCGACCATGC GGCGATCTAT
CTGCTGATCG CCGGCAGCTA TACGCCGTTC ACGCTGGTCA CGCTGCGCGG CCCGTGGGGC
TGGTCGCTGT TCGGCGTGAG CTGGGGGCTC GCCGTGTTCG GCATCGTGCA GGAACTCACG
CTCGGGCGCC GCACCCGCCT GCTGTCGATG ATCCTCTACG TGCTGATGGG CTGGCTCGCG
CTCGTCGCCG TGCGTCCGCT GATCCATGCG CTGCCGCCGA TCGGCACCGC ATGGCTCGTG
GCCGGCGGCG TGATCTACAG CGCGGGGATC TACTTCTTCA TCAACGACGA ACGCATTCGC
CACGGGCACG GCATCTGGCA CCTGTTCGTG CTGGCCGGCA GCCTGTGCCA GTTCGTCAGT
GTCGCGATGT ATGTCGCGTA A
|
|---|
| Protein sequence | MHVGERFNSI SHLVGAVLSV AGLVALVTMG ALEGDPYKVV SFSVYGAMLI LLYAISTAYH
SVRNPRLKAI LQKCDHAAIY LLIAGSYTPF TLVTLRGPWG WSLFGVSWGL AVFGIVQELT
LGRRTRLLSM ILYVLMGWLA LVAVRPLIHA LPPIGTAWLV AGGVIYSAGI YFFINDERIR
HGHGIWHLFV LAGSLCQFVS VAMYVA
|
|---|
| |