Gene Bcen_5259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5259 
Symbol 
ID4094934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2552604 
End bp2553491 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content69% 
IMG OID638018540 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_625106 
Protein GI107027595 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGACCG ACGACGCACG AACCTTCCAC GCGCTGCGCC CGCGCCTGCA GAAGATCGCA 
TACCGGATGC TCGGCTCCGT CGCGGATGCC GAGGACATCG TGCAGGACGT GTGGCTGCGC
TGGCACGACG CGGCGCGCGA CGACATCGAG AACGCCGAGG CGTGGCTCGT CGCGGTCACG
ACGCGCACGT CGATCGATCG CCTGCGCGCG GCGAAGCTCC GGCGCGAGCA CTACACGGGT
ATCTGGCTGC CCGAGCCGGA ACTCGGCGAA TCGCCGGCGA CGCCCGAGGA AATGACGGAG
CGCGCGAACG ACGTGTCGGT CGCGTACCTG CTGTTGCTCG AACGGCTGAC GCCGGAAGCG
CGCGCGGCGT TCCTGCTGCA TGAAATCTTC GAGTTCGACT ACGACCGGAT CGCCGACGCG
ATCGGCAAGA GCGAAGCCGC GTGCCGCCAG CTCGTCAGCC GGGCCCGCGC GCGGCTGCGC
GACGATACGC AGCCGCGGCA CGCGGTGCCG CACGAAACGC ATCGCCGGCT GCTGCAGACG
TTCACGCATG CACTCGCACA CGGCGACTTC CCGTCGATCC AGGCGCTGCT CGCCGAAGAC
GCGATGCTGA TCGGCGACGG CGGCGGCCAT GTCCAGAGCT TCCCGAAACC GATGGTCGGC
GGCCGGCGCA TCGCTCAACT GTTCTATGCG ACGTGGTTGC GCTGCGGCAG CGGTGTCGAG
ATGCGGCCGG TCGTGCTGAA CGGCCAGTGG GCGATGCTGC GCTTCATCGA CGGGCAACTC
GAAGCGGCGA TGTCGTTCGA GACCGACGGC ACGCGCATCG GCCGGATTCT CGTGCAGCGC
AACCCCGACA AGCTCGCGCG GATCGCGGCC GCCTGCACCG CCGGCTGA
 
Protein sequence
MTTDDARTFH ALRPRLQKIA YRMLGSVADA EDIVQDVWLR WHDAARDDIE NAEAWLVAVT 
TRTSIDRLRA AKLRREHYTG IWLPEPELGE SPATPEEMTE RANDVSVAYL LLLERLTPEA
RAAFLLHEIF EFDYDRIADA IGKSEAACRQ LVSRARARLR DDTQPRHAVP HETHRRLLQT
FTHALAHGDF PSIQALLAED AMLIGDGGGH VQSFPKPMVG GRRIAQLFYA TWLRCGSGVE
MRPVVLNGQW AMLRFIDGQL EAAMSFETDG TRIGRILVQR NPDKLARIAA ACTAG