Gene Bcen_5252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5252 
Symbol 
ID4095201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2546833 
End bp2547963 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content68% 
IMG OID638018533 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_625099 
Protein GI107027588 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAACC TCGACAATCC TTCCCATGAT CGCGAGGTAG GCAGCGCCGA CGCGACGCAG 
GACACCACAC GCATCGACGA CGTCCGCATC GGCGCCGTGC GTCCGCTGAT TTCGCCCGCG
CTGCTGCTCG ACGAGCTGCC GGTGCCGGCC GCGACGCAGA CGCTCGTCGA GGATACGCGT
CGCGCGATCG GCGACATCCT GCACGGCCGC GACGACCGGC TGCTGCTCGT CGTCGGCCCG
TGCTCGATCC ACGATCACGA CCAGGCGCTC GATTACGCAC GGCGCCTGAA GGTCGCAGCC
GACGCGCTGA AGGACGACCT GCTGATCACG ATGCGCGTGT ACTTCGAGAA GCCGCGTACG
ACGGTCGGCT GGAAGGGGTA CATCAACGAT CCGCGCCTCG ACGGTAGCTT CCGCATCAAC
GAAGGGCTGC GCGCCGCGCG GCAATTGCTG CTCGACATCA ACGCGCTCGG CCTGCCGGCA
TCGACCGAAT TCCTCGACCT GCTGAGCCCG CAGTACATCG CCGACCTGAT CGCGTGGGGC
GCGATCGGCG CGCGCACGAC CGAGAGCCAG AGCCACCGCC AGCTTGCGTC GGGGTTGAGC
TGCCCGATCG GCTTCAAGAA CGGTACCGAC GGTGGCGTGC AGGTCGCGTC GGACGCAATC
GTCGCCGCGG CGGCGAGCCA TGCGTTCATG GGGATGACGA AGATGGGGAT GGCCGCGATC
TTCGAGACGC GCGGCAACGA CGATGCGCGC GTGATCCTGC GCGGCGGCAA GAACGGCCCG
AACTACGATG CCGAGCACGT CGAGGCGAGT TGCGCGGTGC TGCGCAAGGC CGGGTTGCGC
GAGCAGGTGA TGGTCGACTG CTCGCATGCG AACTCGAACA AGTCGCACGA GCGGCAGATC
GAGGTGGCGC AGGATCTCGC GCGGCAGTTG GGGCAGGGCG AGCACCGGAT CGTCGGCGTG
ATGGTGGAAA GCCATCTCGA AGCGGGCCGG CAGGATCTGA AGCCGGGCGT GCCGCTGAAG
TACGGCGTGT CGATTACCGA CGCGTGCCTG AGCTGGACGC AGACGGAGCC GGTGCTCGAC
GTGCTGGCGG AGGCGGTGCG GCATCGCAGG GTGTATTCGC GCAATGCGTG A
 
Protein sequence
MQNLDNPSHD REVGSADATQ DTTRIDDVRI GAVRPLISPA LLLDELPVPA ATQTLVEDTR 
RAIGDILHGR DDRLLLVVGP CSIHDHDQAL DYARRLKVAA DALKDDLLIT MRVYFEKPRT
TVGWKGYIND PRLDGSFRIN EGLRAARQLL LDINALGLPA STEFLDLLSP QYIADLIAWG
AIGARTTESQ SHRQLASGLS CPIGFKNGTD GGVQVASDAI VAAAASHAFM GMTKMGMAAI
FETRGNDDAR VILRGGKNGP NYDAEHVEAS CAVLRKAGLR EQVMVDCSHA NSNKSHERQI
EVAQDLARQL GQGEHRIVGV MVESHLEAGR QDLKPGVPLK YGVSITDACL SWTQTEPVLD
VLAEAVRHRR VYSRNA