| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5246 |
|---|
| Symbol | |
|---|
| ID | 4095195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | + |
|---|
| Start bp | 2540708 |
|---|
| End bp | 2541604 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638018527 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_625093 |
|---|
| Protein GI | 107027582 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCATCC TGTTGAAAGG CATCATTGCC TACCCGGTCA CGCCGTTCTC CGCCGACGGC
GACGTCGACC TGACAGCGCT CGATGCGCTG ATCGAACGCC TGATCGCCGA CGGCGTTCAC
GCGATCGCGC CGCTGGGCAG TACCGGCGAA AGCGCCTACC TGTCCGACGC CGAATGGGAG
GCCGTCGCTA CCGCGTCGAT TCGCGCGGTG CGCCGGCGCG TGCCGACCGT CGTCGGAATT
TCCGATCTCA CCACGGCGGG CGCGGTGCGC CGCGCCCGCT TTGCCGAGCA GGCCGGCGCC
GATGCGGTGA TGGTGCTGCC GGTGTCGTAC TGGAAGCTCG GCAACGACGA GATCGTCGCG
CACTACCGTG CGATCGGCGA CGCGATCGGC ATCCCGATCA TGCTGTACAA CAACCCGGCG
ACGAGCGGCG TCGACATGTC GCCCGAGCTG ATCGCGACGA TCTGCCAGAC CGTCGACAAC
GTGACGATGG TGAAGGAAAG CACCGGCGAC ATCGGCCGGA TACACCGGCT CGCGCAATTG
AGCGACGGCA CGATCCCGTT CTACAACGGC AGCAATCCGA TGGCGCTCGC CGCGCTGGCC
GCCGGCGCGG CCGGATGGTG CACGGCCGCG CCGAACCTGA ATGCCGCGTT GCCGCTCGCG
TTGTTCGACG CGATGTGCGC GGGCGACCTC GCGCGCGCCC GATCGGTCTT TCACGCGCAG
TTGCCGTTGC TGCAGTTCAT CGTCAACGGC GGGTTGCCGG TGACCGTGAA GGCCGGGCTG
AGGCTGCGCG GCTTCGACGC CGGCGAACCG CGGCGACCGC TGCTGCCGCT CGGCGACGCA
CGCACACGAG AACTCGAGCG CCTGCTCGCG GCGCTGCCGG ACGGTGTGGC GGCATGA
|
|---|
| Protein sequence | MSILLKGIIA YPVTPFSADG DVDLTALDAL IERLIADGVH AIAPLGSTGE SAYLSDAEWE
AVATASIRAV RRRVPTVVGI SDLTTAGAVR RARFAEQAGA DAVMVLPVSY WKLGNDEIVA
HYRAIGDAIG IPIMLYNNPA TSGVDMSPEL IATICQTVDN VTMVKESTGD IGRIHRLAQL
SDGTIPFYNG SNPMALAALA AGAAGWCTAA PNLNAALPLA LFDAMCAGDL ARARSVFHAQ
LPLLQFIVNG GLPVTVKAGL RLRGFDAGEP RRPLLPLGDA RTRELERLLA ALPDGVAA
|
|---|
| |